RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 MYO1CO00159 1063 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 NLRP6P59044 892 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 PPP2R5AQ15172 486 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 PIBF1Q8WXW3 757 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
CTSE-201ENST00000358184 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
CTSE-201ENST00000358184 DIAPH3Q9NSV4 1193 aa12.63□□□□□ -0.39
CTSE-201ENST00000358184 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
CTSE-201ENST00000358184 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
CTSE-201ENST00000358184 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTSE-201ENST00000358184 KIF18AQ8NI77 898 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 ZNF446Q9NWS9 450 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
CTSE-201ENST00000358184 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 IPO7O95373 1038 aaKnown RBP12.62□□□□□ -0.39
CTSE-201ENST00000358184 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
CTSE-201ENST00000358184 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 C1QTNF12Q5T7M4 302 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 TBC1D22AQ8WUA7 517 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
CTSE-201ENST00000358184 TRPM3Q9HCF6 1732 aaPredicted RBP12.61□□□□□ -0.39
CTSE-201ENST00000358184 H0YHG0 523 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 SARNPP82979 210 aaKnown RBP12.61□□□□□ -0.39
CTSE-201ENST00000358184 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 ANKRD33BA6NCL7 494 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 PXDNQ92626 1479 aa12.61□□□□□ -0.39
CTSE-201ENST00000358184 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
CTSE-201ENST00000358184 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 MKL1Q969V6 931 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTSE-201ENST00000358184 COL3A1P02461 1466 aaPredicted RBP12.6□□□□□ -0.39
CTSE-201ENST00000358184 TRIM66O15016 1216 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 NRDCO43847 1150 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 INHBEP58166 350 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
CTSE-201ENST00000358184 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
CTSE-201ENST00000358184 SYT10Q6XYQ8 523 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 FAM184AQ8NB25 1140 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 SPTLC3Q9NUV7 552 aa12.6□□□□□ -0.39
CTSE-201ENST00000358184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTSE-201ENST00000358184 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
CTSE-201ENST00000358184 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
CTSE-201ENST00000358184 SUGP1Q8IWZ8 645 aaKnown RBP12.59□□□□□ -0.39
CTSE-201ENST00000358184 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
CTSE-201ENST00000358184 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
CTSE-201ENST00000358184 TSPAN18Q96SJ8 248 aa12.59□□□□□ -0.39
CTSE-201ENST00000358184 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
CTSE-201ENST00000358184 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
CTSE-201ENST00000358184 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CTSE-201ENST00000358184 RIOK3O14730 519 aaKnown RBP12.58□□□□□ -0.39
CTSE-201ENST00000358184 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.39
CTSE-201ENST00000358184 DDIT3P35638 169 aa12.58□□□□□ -0.39
CTSE-201ENST00000358184 CCT2P78371 535 aaKnown RBP12.58□□□□□ -0.39
CTSE-201ENST00000358184 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.39
CTSE-201ENST00000358184 BCL2L13Q9BXK5 485 aa12.58□□□□□ -0.39
CTSE-201ENST00000358184 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.39
CTSE-201ENST00000358184 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.58□□□□□ -0.39
CTSE-201ENST00000358184 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.39
CTSE-201ENST00000358184 DIAPH1O60610 1272 aaKnown RBP12.58□□□□□ -0.4
CTSE-201ENST00000358184 FBLN1P23142 703 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 MAP2K2P36507 400 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
CTSE-201ENST00000358184 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
CTSE-201ENST00000358184 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 SPATA31A3Q5VYP0 1347 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.4
CTSE-201ENST00000358184 MARF1Q9Y4F3 1742 aaKnown RBP12.58□□□□□ -0.4
CTSE-201ENST00000358184 TPM3P06753 285 aa12.57□□□□□ -0.4
CTSE-201ENST00000358184 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
CTSE-201ENST00000358184 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
CTSE-201ENST00000358184 SLIT3O75094 1523 aa12.57□□□□□ -0.4
CTSE-201ENST00000358184 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
CTSE-201ENST00000358184 ANKRD20A12PQ8NF67 263 aa12.57□□□□□ -0.4
CTSE-201ENST00000358184 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
CTSE-201ENST00000358184 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
CTSE-201ENST00000358184 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 MCTP2Q6DN12 878 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 PIK3R5Q8WYR1 880 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 FLT4P35916 1363 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 TOM1O60784 492 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 TXLNBQ8N3L3 684 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
CTSE-201ENST00000358184 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
CTSE-201ENST00000358184 NFAT5O94916 1531 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms