RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 KRT28Q7Z3Y7 464 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 SUCLG2Q96I99 432 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 RGPD8O14715 1765 aaPredicted RBP9.95□□□□□ -0.82
CD46-205ENST00000358170 GLRX3O76003 335 aaKnown RBP9.95□□□□□ -0.82
CD46-205ENST00000358170 HSPA4P34932 840 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 KCNH5Q8NCM2 988 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 ECHDC1Q9NTX5 307 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 CHGBP05060 677 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CD46-205ENST00000358170 KSR2Q6VAB6 950 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 ZNF830Q96NB3 372 aaPredicted RBP9.95□□□□□ -0.82
CD46-205ENST00000358170 DNAJC2Q99543 621 aaKnown RBP9.95□□□□□ -0.82
CD46-205ENST00000358170 PDRG1Q9NUG6 133 aa9.95□□□□□ -0.82
CD46-205ENST00000358170 HSP90AB4PQ58FF6 505 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 XAGE3Q8WTP9 111 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 EAF2Q96CJ1 260 aaPredicted RBP9.94□□□□□ -0.82
CD46-205ENST00000358170 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
CD46-205ENST00000358170 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 DIP2AQ14689 1571 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 GRM8O00222 908 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 SYT1P21579 422 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 ZNF445P59923 1031 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 FGD1P98174 961 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 POLA2Q14181 598 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 LSG1Q9H089 658 aaKnown RBP9.94□□□□□ -0.82
CD46-205ENST00000358170 LIMCH1Q9UPQ0 1083 aa9.94□□□□□ -0.82
CD46-205ENST00000358170 WDR33Q9C0J8 1336 aaKnown RBP9.94□□□□□ -0.82
CD46-205ENST00000358170 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 ZKSCAN1P17029 563 aaPredicted RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 ANAPC15P60006 121 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 NEXNQ0ZGT2 675 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 DNTTIP2Q5QJE6 756 aaKnown RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 LRSAM1Q6UWE0 723 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 RUFY2Q8WXA3 655 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 CCDC85AQ96PX6 553 aaPredicted RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 DDX58O95786 925 aaKnown RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 GJB2P29033 226 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 RBM10P98175 930 aaKnown RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 NMIQ13287 307 aaPredicted RBP9.93□□□□□ -0.82
CD46-205ENST00000358170 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 UBE3BQ7Z3V4 1068 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 NEUROD6Q96NK8 337 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 RAD50Q92878 1312 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 ADCY9O60503 1353 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
CD46-205ENST00000358170 STX6O43752 255 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 MBD3O95983 291 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 DNM1Q05193 864 aaKnown RBP9.92□□□□□ -0.82
CD46-205ENST00000358170 CUL4AQ13619 759 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 TTC5Q8N0Z6 440 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 LRRC2Q9BYS8 371 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 AMOTQ4VCS5 1084 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 GIMAP6Q6P9H5 292 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 ARHGEF25Q86VW2 580 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 TFIP11Q9UBB9 837 aaKnown RBP9.92□□□□□ -0.82
CD46-205ENST00000358170 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
CD46-205ENST00000358170 HCLS1P14317 486 aaPredicted RBP9.92□□□□□ -0.82
CD46-205ENST00000358170 ZNF496Q96IT1 587 aaPredicted RBP9.92□□□□□ -0.82
CD46-205ENST00000358170 USP25Q9UHP3 1055 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 TAF6LQ9Y6J9 622 aa9.92□□□□□ -0.82
CD46-205ENST00000358170 REREQ9P2R6 1566 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 A0A0G2JS52 829 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 SASH1O94885 1247 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 CAMK4Q16566 473 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 EPHA10Q5JZY3 1008 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 SYAP1Q96A49 352 aaPredicted RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 NRKQ7Z2Y5 1582 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 CCDC129Q6ZRS4 1044 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 A0A0D9SFI3 127 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
CD46-205ENST00000358170 ZNF790Q6PG37 636 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 LINS1Q8NG48 757 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
CD46-205ENST00000358170 INTS4Q96HW7 963 aaKnown RBP9.9□□□□□ -0.82
CD46-205ENST00000358170 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
CD46-205ENST00000358170 DDX46Q7L014 1031 aaKnown RBP9.9□□□□□ -0.82
CD46-205ENST00000358170 KAZALD1Q96I82 304 aa9.9□□□□□ -0.82
CD46-205ENST00000358170 PPP1R9BQ96SB3 815 aa9.9□□□□□ -0.82
CD46-205ENST00000358170 SEC62Q99442 399 aaKnown RBP9.9□□□□□ -0.82
CD46-205ENST00000358170 GOLGA6L4A6NEF3 574 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
CD46-205ENST00000358170 HSP90AA2PQ14568 343 aaPredicted RBP9.89□□□□□ -0.83
CD46-205ENST00000358170 ME3Q16798 604 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 DDX21Q9NR30 783 aaKnown RBP eCLIP9.89□□□□□ -0.83
CD46-205ENST00000358170 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
CD46-205ENST00000358170 A0A087WZG4 1122 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms