RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PANK2Q9BZ23 570 aa19.25■□□□□ 0.67
PHTF1-201ENST00000357783 CYP27B1O15528 508 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 IGKV5-2P06315 115 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
PHTF1-201ENST00000357783 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
PHTF1-201ENST00000357783 SGSM2O43147 1006 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 GLRX3O76003 335 aaKnown RBP19.24■□□□□ 0.67
PHTF1-201ENST00000357783 PIP4K2AP48426 406 aaPredicted RBP19.24■□□□□ 0.67
PHTF1-201ENST00000357783 MCM2P49736 904 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 TTC41PQ6P2S7 1318 aa19.24■□□□□ 0.67
PHTF1-201ENST00000357783 SPATA31A3Q5VYP0 1347 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 IFIT2P09913 472 aaKnown RBP19.23■□□□□ 0.67
PHTF1-201ENST00000357783 LARP1Q6PKG0 1096 aaKnown RBP19.23■□□□□ 0.67
PHTF1-201ENST00000357783 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
PHTF1-201ENST00000357783 COPS6Q7L5N1 327 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 ERC1Q8IUD2 1116 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 UTYO14607 1347 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 HSPA4P34932 840 aa19.23■□□□□ 0.67
PHTF1-201ENST00000357783 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 AACSQ86V21 672 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 ZDHHC9Q9Y397 364 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 RAD50Q92878 1312 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 MYD88Q99836 296 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
PHTF1-201ENST00000357783 DDX49Q9Y6V7 483 aaKnown RBP19.22■□□□□ 0.67
PHTF1-201ENST00000357783 MRE11P49959 708 aa19.21■□□□□ 0.67
PHTF1-201ENST00000357783 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
PHTF1-201ENST00000357783 ABCC6O95255 1503 aa19.21■□□□□ 0.67
PHTF1-201ENST00000357783 NEURL1BA8MQ27 555 aa19.21■□□□□ 0.67
PHTF1-201ENST00000357783 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 FOXD4L5Q5VV16 416 aaPredicted RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 IL17RAQ96F46 866 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 LSG1Q9H089 658 aaKnown RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 SIL1Q9H173 461 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 GRPEL1Q9HAV7 217 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 DIAPH3Q9NSV4 1193 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 MRC1P22897 1456 aa19.2■□□□□ 0.66
PHTF1-201ENST00000357783 EPB41L2O43491 1005 aaKnown RBP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
PHTF1-201ENST00000357783 CUL4AQ13619 759 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 GAS2L3Q86XJ1 694 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 SASH1O94885 1247 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 CABP4P57796 275 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 GCKRQ14397 625 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 KIAA1211Q6ZU35 1233 aa19.19■□□□□ 0.66
PHTF1-201ENST00000357783 METTL22Q9BUU2 404 aaPredicted RBP19.19■□□□□ 0.66
PHTF1-201ENST00000357783 KLHL40Q2TBA0 621 aa19.18■□□□□ 0.66
PHTF1-201ENST00000357783 KLHDC4Q8TBB5 520 aa19.18■□□□□ 0.66
PHTF1-201ENST00000357783 CHAMP1Q96JM3 812 aa19.18■□□□□ 0.66
PHTF1-201ENST00000357783 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
PHTF1-201ENST00000357783 JARID2Q92833 1246 aaPredicted RBP19.18■□□□□ 0.66
PHTF1-201ENST00000357783 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
PHTF1-201ENST00000357783 CPDO75976 1380 aa19.18■□□□□ 0.66
PHTF1-201ENST00000357783 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
PHTF1-201ENST00000357783 SNX14Q9Y5W7 946 aa19.17■□□□□ 0.66
PHTF1-201ENST00000357783 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
PHTF1-201ENST00000357783 EPHA10Q5JZY3 1008 aa19.17■□□□□ 0.66
PHTF1-201ENST00000357783 LRP10Q7Z4F1 713 aa19.17■□□□□ 0.66
PHTF1-201ENST00000357783 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
PHTF1-201ENST00000357783 LMBRD1Q9NUN5 540 aa19.17■□□□□ 0.66
PHTF1-201ENST00000357783 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
PHTF1-201ENST00000357783 BRINP3Q76B58 766 aa19.16■□□□□ 0.66
PHTF1-201ENST00000357783 NCLP19338 710 aaKnown RBP19.16■□□□□ 0.66
PHTF1-201ENST00000357783 RASEFQ8IZ41 740 aa19.16■□□□□ 0.66
PHTF1-201ENST00000357783 TLR7Q9NYK1 1049 aaKnown RBP19.16■□□□□ 0.66
PHTF1-201ENST00000357783 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
PHTF1-201ENST00000357783 RUFY2Q8WXA3 655 aa19.15■□□□□ 0.66
PHTF1-201ENST00000357783 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
PHTF1-201ENST00000357783 PRPF40AO75400 957 aaKnown RBP19.15■□□□□ 0.66
PHTF1-201ENST00000357783 INTS4Q96HW7 963 aaKnown RBP19.15■□□□□ 0.66
PHTF1-201ENST00000357783 EVI5LQ96CN4 794 aa19.14■□□□□ 0.65
PHTF1-201ENST00000357783 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.14■□□□□ 0.65
PHTF1-201ENST00000357783 PTH1RQ03431 593 aa19.14■□□□□ 0.65
PHTF1-201ENST00000357783 PLEKHG2Q9H7P9 1386 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 ATP5J2-PTCD1G3V325 749 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
PHTF1-201ENST00000357783 ARFGEF2Q9Y6D5 1785 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 CAVIN1Q6NZI2 390 aaKnown RBP19.13■□□□□ 0.65
PHTF1-201ENST00000357783 TOM1L2Q6ZVM7 507 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 UBE3BQ7Z3V4 1068 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
PHTF1-201ENST00000357783 BRD1O95696 1058 aa19.12■□□□□ 0.65
PHTF1-201ENST00000357783 LARP6Q9BRS8 491 aaKnown RBP19.12■□□□□ 0.65
PHTF1-201ENST00000357783 GLI3P10071 1580 aa19.12■□□□□ 0.65
PHTF1-201ENST00000357783 PARP4Q9UKK3 1724 aaKnown RBP19.11■□□□□ 0.65
PHTF1-201ENST00000357783 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
PHTF1-201ENST00000357783 BOLA2Q9H3K6 86 aa19.11■□□□□ 0.65
PHTF1-201ENST00000357783 CPA1P15085 419 aa19.11■□□□□ 0.65
PHTF1-201ENST00000357783 TTC14Q96N46 770 aa19.11■□□□□ 0.65
PHTF1-201ENST00000357783 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
PHTF1-201ENST00000357783 AK2P54819 239 aa19.1■□□□□ 0.65
PHTF1-201ENST00000357783 PRPF40BQ6NWY9 871 aaKnown RBP19.1■□□□□ 0.65
PHTF1-201ENST00000357783 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms