RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PI4KAP2A4QPH2 592 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 TRAPPC3LQ5T215 181 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 PI4KAP1Q8N8J0 262 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 SRP68Q9UHB9 627 aaKnown RBP32.36■■■□□ 2.77
SSBP3-202ENST00000357475 PNPLA7Q6ZV29 1317 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 SSFA2P28290 1259 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 ZKSCAN2Q63HK3 967 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 ATF7IPQ6VMQ6 1270 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 ANKRD13DQ6ZTN6 518 aa32.36■■■□□ 2.77
SSBP3-202ENST00000357475 HMGB2P26583 209 aaKnown RBP32.35■■■□□ 2.77
SSBP3-202ENST00000357475 COL23A1Q86Y22 540 aaPredicted RBP32.35■■■□□ 2.77
SSBP3-202ENST00000357475 CLUAP1Q96AJ1 413 aa32.35■■■□□ 2.77
SSBP3-202ENST00000357475 MAP3K2Q9Y2U5 619 aa32.35■■■□□ 2.77
SSBP3-202ENST00000357475 MAP3K15Q6ZN16 1313 aa32.34■■■□□ 2.77
SSBP3-202ENST00000357475 CAMTA2O94983 1202 aa32.34■■■□□ 2.77
SSBP3-202ENST00000357475 HLFQ16534 295 aa32.34■■■□□ 2.77
SSBP3-202ENST00000357475 C20orf194Q5TEA3 1177 aa32.34■■■□□ 2.77
SSBP3-202ENST00000357475 KIF6Q6ZMV9 814 aa32.34■■■□□ 2.77
SSBP3-202ENST00000357475 NPM2Q86SE8 214 aaKnown RBP32.34■■■□□ 2.77
SSBP3-202ENST00000357475 KSR2Q6VAB6 950 aa32.33■■■□□ 2.77
SSBP3-202ENST00000357475 PLBD2Q8NHP8 589 aa32.33■■■□□ 2.77
SSBP3-202ENST00000357475 ARHGAP45Q92619 1136 aa32.33■■■□□ 2.77
SSBP3-202ENST00000357475 RLBP1P12271 317 aa32.32■■■□□ 2.76
SSBP3-202ENST00000357475 RIC3Q7Z5B4 369 aa32.32■■■□□ 2.76
SSBP3-202ENST00000357475 A0A087WZG4 1122 aa32.31■■■□□ 2.76
SSBP3-202ENST00000357475 IPO8O15397 1037 aaKnown RBP32.31■■■□□ 2.76
SSBP3-202ENST00000357475 DDX58O95786 925 aaKnown RBP32.31■■■□□ 2.76
SSBP3-202ENST00000357475 ADRA2BP18089 450 aa32.31■■■□□ 2.76
SSBP3-202ENST00000357475 PDGFDQ9GZP0 370 aaPredicted RBP32.31■■■□□ 2.76
SSBP3-202ENST00000357475 RFC4P35249 363 aa32.31■■■□□ 2.76
SSBP3-202ENST00000357475 USPL1Q5W0Q7 1092 aa32.31■■■□□ 2.76
SSBP3-202ENST00000357475 API5Q9BZZ5 524 aaKnown RBP32.31■■■□□ 2.76
SSBP3-202ENST00000357475 NARFQ9UHQ1 456 aa32.31■■■□□ 2.76
SSBP3-202ENST00000357475 ANKRD36CQ5JPF3 1778 aa32.3■■■□□ 2.76
SSBP3-202ENST00000357475 PANK1Q8TE04 598 aa32.3■■■□□ 2.76
SSBP3-202ENST00000357475 BCL2L12Q9HB09 334 aa32.3■■■□□ 2.76
SSBP3-202ENST00000357475 USP42Q9H9J4 1324 aaKnown RBP32.29■■■□□ 2.76
SSBP3-202ENST00000357475 N4BP2Q86UW6 1770 aaPredicted RBP32.29■■■□□ 2.76
SSBP3-202ENST00000357475 DNAAF4Q8WXU2 420 aa32.29■■■□□ 2.76
SSBP3-202ENST00000357475 ABCC4O15439 1325 aa32.29■■■□□ 2.76
SSBP3-202ENST00000357475 SLC4A10Q6U841 1118 aa32.28■■■□□ 2.76
SSBP3-202ENST00000357475 AFDNP55196 1824 aaKnown RBP32.27■■■□□ 2.76
SSBP3-202ENST00000357475 ERVV-1B6SEH8 477 aa32.26■■■□□ 2.76
SSBP3-202ENST00000357475 MSH5O43196 834 aa32.26■■■□□ 2.76
SSBP3-202ENST00000357475 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.26■■■□□ 2.76
SSBP3-202ENST00000357475 ZPR1O75312 459 aa32.26■■■□□ 2.75
SSBP3-202ENST00000357475 DZIP1LQ8IYY4 767 aaKnown RBP32.26■■■□□ 2.75
SSBP3-202ENST00000357475 MYD88Q99836 296 aa32.26■■■□□ 2.75
SSBP3-202ENST00000357475 METTL22Q9BUU2 404 aaPredicted RBP32.26■■■□□ 2.75
SSBP3-202ENST00000357475 GIGYF2Q6Y7W6 1299 aaKnown RBP32.25■■■□□ 2.75
SSBP3-202ENST00000357475 ATP5J2-PTCD1G3V325 749 aa32.24■■■□□ 2.75
SSBP3-202ENST00000357475 TMEM57Q8N5G2 664 aa32.24■■■□□ 2.75
SSBP3-202ENST00000357475 IGKV5-2P06315 115 aa32.23■■■□□ 2.75
SSBP3-202ENST00000357475 GYS1P13807 737 aa32.23■■■□□ 2.75
SSBP3-202ENST00000357475 IRX6P78412 446 aaPredicted RBP32.23■■■□□ 2.75
SSBP3-202ENST00000357475 R3HDM1Q15032 1099 aaKnown RBP32.23■■■□□ 2.75
SSBP3-202ENST00000357475 FLAD1Q8NFF5 587 aa32.23■■■□□ 2.75
SSBP3-202ENST00000357475 PXDNLA1KZ92 1463 aa32.23■■■□□ 2.75
SSBP3-202ENST00000357475 FKBP8Q14318 412 aa32.22■■■□□ 2.75
SSBP3-202ENST00000357475 BEND3Q5T5X7 828 aa32.22■■■□□ 2.75
SSBP3-202ENST00000357475 FTSJ3Q8IY81 847 aaKnown RBP32.22■■■□□ 2.75
SSBP3-202ENST00000357475 CASZ1Q86V15 1759 aa32.21■■■□□ 2.75
SSBP3-202ENST00000357475 TCIRG1Q13488 830 aa32.21■■■□□ 2.75
SSBP3-202ENST00000357475 CWF19L2Q2TBE0 894 aaKnown RBP32.21■■■□□ 2.75
SSBP3-202ENST00000357475 GPTP24298 496 aa32.21■■■□□ 2.75
SSBP3-202ENST00000357475 ATP10DQ9P241 1426 aa32.2■■■□□ 2.75
SSBP3-202ENST00000357475 PSDA5PKW4 1024 aaPredicted RBP32.2■■■□□ 2.74
SSBP3-202ENST00000357475 TBC1D9BQ66K14 1250 aa32.2■■■□□ 2.74
SSBP3-202ENST00000357475 SOCS7O14512 581 aa32.19■■■□□ 2.74
SSBP3-202ENST00000357475 UBN2Q6ZU65 1347 aa32.18■■■□□ 2.74
SSBP3-202ENST00000357475 PDE3AQ14432 1141 aa32.18■■■□□ 2.74
SSBP3-202ENST00000357475 ISCA1Q9BUE6 129 aa32.18■■■□□ 2.74
SSBP3-202ENST00000357475 COG6Q9Y2V7 657 aa32.18■■■□□ 2.74
SSBP3-202ENST00000357475 INTS3Q68E01 1043 aaKnown RBP32.17■■■□□ 2.74
SSBP3-202ENST00000357475 CLEC4GQ6UXB4 293 aa32.17■■■□□ 2.74
SSBP3-202ENST00000357475 BICDL1Q6ZP65 573 aa32.17■■■□□ 2.74
SSBP3-202ENST00000357475 MSL1Q68DK7 614 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 ZNF34Q8IZ26 560 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 ZNF652Q9Y2D9 606 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 NEURL1BA8MQ27 555 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 LINS1Q8NG48 757 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 SRCIN1Q9C0H9 1055 aa32.16■■■□□ 2.74
SSBP3-202ENST00000357475 NEXNQ0ZGT2 675 aa32.15■■■□□ 2.74
SSBP3-202ENST00000357475 NIP7Q9Y221 180 aaKnown RBP eCLIP32.15■■■□□ 2.74
SSBP3-202ENST00000357475 COL24A1Q17RW2 1714 aa32.15■■■□□ 2.74
SSBP3-202ENST00000357475 CCT4P50991 539 aaKnown RBP32.14■■■□□ 2.74
SSBP3-202ENST00000357475 HSP90AB3PQ58FF7 597 aa32.14■■■□□ 2.74
SSBP3-202ENST00000357475 ITPRIPQ8IWB1 547 aa32.14■■■□□ 2.74
SSBP3-202ENST00000357475 RGL2O15211 777 aa32.13■■■□□ 2.73
SSBP3-202ENST00000357475 NFIXQ14938 502 aa32.13■■■□□ 2.73
SSBP3-202ENST00000357475 CRBNQ96SW2 442 aa32.13■■■□□ 2.73
SSBP3-202ENST00000357475 MS4A1P11836 297 aa32.12■■■□□ 2.73
SSBP3-202ENST00000357475 NLRP10Q86W26 655 aa32.12■■■□□ 2.73
SSBP3-202ENST00000357475 JARID2Q92833 1246 aaPredicted RBP32.11■■■□□ 2.73
SSBP3-202ENST00000357475 FAM177BA6PVY3 158 aa32.1■■■□□ 2.73
SSBP3-202ENST00000357475 MVPQ14764 893 aaKnown RBP32.1■■■□□ 2.73
SSBP3-202ENST00000357475 ALDH1L1O75891 902 aa32.1■■■□□ 2.73
SSBP3-202ENST00000357475 TRIM28Q13263 835 aaKnown RBP32.1■■■□□ 2.73
SSBP3-202ENST00000357475 GCKRQ14397 625 aa32.1■■■□□ 2.73
SSBP3-202ENST00000357475 SUSD4Q5VX71 490 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms