RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 NUP98P52948 1817 aa20.47■□□□□ 0.87
FDPS-201ENST00000356657 CAMTA2O94983 1202 aa20.46■□□□□ 0.87
FDPS-201ENST00000356657 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
FDPS-201ENST00000356657 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
FDPS-201ENST00000356657 ANKRD36CQ5JPF3 1778 aa20.45■□□□□ 0.86
FDPS-201ENST00000356657 GYS1P13807 737 aa20.44■□□□□ 0.86
FDPS-201ENST00000356657 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
FDPS-201ENST00000356657 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
FDPS-201ENST00000356657 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
FDPS-201ENST00000356657 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
FDPS-201ENST00000356657 ANXA1P04083 346 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 FLIIQ13045 1269 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 USPL1Q5W0Q7 1092 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 ANKRD13DQ6ZTN6 518 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 ARXQ96QS3 562 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 ATP10DQ9P241 1426 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 PTPRCP08575 1304 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
FDPS-201ENST00000356657 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
FDPS-201ENST00000356657 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
FDPS-201ENST00000356657 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
FDPS-201ENST00000356657 SRP68Q9UHB9 627 aaKnown RBP20.42■□□□□ 0.86
FDPS-201ENST00000356657 POLD1P28340 1107 aa20.41■□□□□ 0.86
FDPS-201ENST00000356657 AIMP1Q12904 312 aaKnown RBP20.41■□□□□ 0.86
FDPS-201ENST00000356657 SMIM5Q71RC9 77 aa20.41■□□□□ 0.86
FDPS-201ENST00000356657 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
FDPS-201ENST00000356657 KSR2Q6VAB6 950 aa20.4■□□□□ 0.86
FDPS-201ENST00000356657 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
FDPS-201ENST00000356657 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
FDPS-201ENST00000356657 PTGER2P43116 358 aa20.39■□□□□ 0.85
FDPS-201ENST00000356657 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.85
FDPS-201ENST00000356657 ZBTB3Q9H5J0 574 aa20.39■□□□□ 0.85
FDPS-201ENST00000356657 CARMIL3Q8ND23 1372 aa20.39■□□□□ 0.85
FDPS-201ENST00000356657 IBTKQ9P2D0 1353 aaPredicted RBP20.38■□□□□ 0.85
FDPS-201ENST00000356657 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
FDPS-201ENST00000356657 FKBP8Q14318 412 aa20.38■□□□□ 0.85
FDPS-201ENST00000356657 RIC3Q7Z5B4 369 aa20.38■□□□□ 0.85
FDPS-201ENST00000356657 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 ARHGAP45Q92619 1136 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 NRXN2Q9P2S2 1712 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
FDPS-201ENST00000356657 TM4SF1P30408 202 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 NEXNQ0ZGT2 675 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 KLHL34Q8N239 644 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
FDPS-201ENST00000356657 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 PI4KAP2A4QPH2 592 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 MMP10P09238 476 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
FDPS-201ENST00000356657 TCIRG1Q13488 830 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 G2E3Q7L622 706 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 PI4KAP1Q8N8J0 262 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 SGIP1Q9BQI5 828 aa20.36■□□□□ 0.85
FDPS-201ENST00000356657 N4BP2Q86UW6 1770 aaPredicted RBP20.35■□□□□ 0.85
FDPS-201ENST00000356657 ADCY9O60503 1353 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 NFIXQ14938 502 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 HLFQ16534 295 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 ZNF34Q8IZ26 560 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 METTL22Q9BUU2 404 aaPredicted RBP20.35■□□□□ 0.85
FDPS-201ENST00000356657 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
FDPS-201ENST00000356657 PARP3Q9Y6F1 533 aa20.35■□□□□ 0.85
FDPS-201ENST00000356657 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
FDPS-201ENST00000356657 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
FDPS-201ENST00000356657 API5Q9BZZ5 524 aaKnown RBP20.34■□□□□ 0.85
FDPS-201ENST00000356657 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
FDPS-201ENST00000356657 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
FDPS-201ENST00000356657 NYXQ9GZU5 481 aa20.33■□□□□ 0.85
FDPS-201ENST00000356657 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
FDPS-201ENST00000356657 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
FDPS-201ENST00000356657 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
FDPS-201ENST00000356657 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
FDPS-201ENST00000356657 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
FDPS-201ENST00000356657 FHDC1Q9C0D6 1143 aaPredicted RBP20.31■□□□□ 0.84
FDPS-201ENST00000356657 TPTE2Q6XPS3 522 aa20.3■□□□□ 0.84
FDPS-201ENST00000356657 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
FDPS-201ENST00000356657 DDR1Q08345 913 aa20.3■□□□□ 0.84
FDPS-201ENST00000356657 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
FDPS-201ENST00000356657 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 BCAR3O75815 825 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 SERPINB2P05120 415 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 MS4A1P11836 297 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
FDPS-201ENST00000356657 ZKSCAN2Q63HK3 967 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 ATF7IPQ6VMQ6 1270 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 BICDL1Q6ZP65 573 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
FDPS-201ENST00000356657 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
FDPS-201ENST00000356657 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
FDPS-201ENST00000356657 C10orf71Q711Q0 1435 aa20.28■□□□□ 0.84
FDPS-201ENST00000356657 MYD88Q99836 296 aa20.28■□□□□ 0.84
FDPS-201ENST00000356657 NPHP1O15259 732 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms