RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 DYDC1Q8WWB3 177 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 PLEKHH1Q9ULM0 1364 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 DNMT1P26358 1616 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 POLD1P28340 1107 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 TAF3Q5VWG9 929 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 LRRC27Q9C0I9 530 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 EXOC5O00471 708 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 MCM3P25205 808 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 MVPQ14764 893 aaKnown RBP6.4□□□□□ -1.38
PTPRD-202ENST00000356435 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 ALS2CR12Q96Q35 445 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 ZNF521Q96K83 1311 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC178Q5BJE1 867 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 LUZP1Q86V48 1076 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 FAM114A1Q8IWE2 563 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 SNX21Q969T3 373 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 VTI1AQ96AJ9 217 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 BICD1Q96G01 975 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 MACROD2A1Z1Q3 448 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.38
PTPRD-202ENST00000356435 USP37Q86T82 979 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 MYD88Q99836 296 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
PTPRD-202ENST00000356435 BCAR3O75815 825 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 MX1P20591 662 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 UTP14AQ9BVJ6 771 aaKnown RBP6.4□□□□□ -1.38
PTPRD-202ENST00000356435 TAOK3Q9H2K8 898 aa6.4□□□□□ -1.38
PTPRD-202ENST00000356435 RRAGDQ9NQL2 400 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-202ENST00000356435 TBCAO75347 108 aaKnown RBP6.4□□□□□ -1.39
PTPRD-202ENST00000356435 AMPD3Q01432 767 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 TRAF1Q13077 416 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 RPAP2Q8IXW5 612 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.39
PTPRD-202ENST00000356435 CALML4Q96GE6 196 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 HYPKQ9NX55 129 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 NFE2L2Q16236 605 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 CHD1LQ86WJ1 897 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 GBP3Q9H0R5 595 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 RFC4P35249 363 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 SREK1Q8WXA9 508 aaKnown RBP6.4□□□□□ -1.39
PTPRD-202ENST00000356435 NUDT16Q96DE0 195 aaKnown RBP6.4□□□□□ -1.39
PTPRD-202ENST00000356435 SAMM50Q9Y512 469 aa6.4□□□□□ -1.39
PTPRD-202ENST00000356435 ZSCAN12O43309 604 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 MPRIPQ6WCQ1 1025 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 NSD3Q9BZ95 1437 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 DDX12PQ92771 950 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC102AQ96A19 550 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 CEP63Q96MT8 703 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KIAA0586Q9BVV6 1533 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 GOLGA8AA7E2F4 631 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 GOLGA8BA8MQT2 603 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 PTCD1O75127 700 aaKnown RBP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KIF4AO95239 1232 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 MAP2K1Q02750 393 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 MAP9Q49MG5 647 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KIF1BPQ96EK5 621 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KIF2AO00139 706 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 USP8P40818 1118 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 NBPF5PQ86XG9 351 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 CLEC11AQ9Y240 323 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 DYNC1I1O14576 645 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 GLRX3O76003 335 aaKnown RBP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 YEATS4O95619 227 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 CFAP100Q494V2 611 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 NUTM1Q86Y26 1132 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KAT14Q9H8E8 782 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC174Q6PII3 467 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 ANTXR1Q9H6X2 564 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KDM5CP41229 1560 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 IFFO1Q0D2I5 559 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 KLHL40Q2TBA0 621 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 SMC5Q8IY18 1101 aa6.39□□□□□ -1.39
PTPRD-202ENST00000356435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPRD-202ENST00000356435 ACTN2P35609 894 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 SYCP3Q8IZU3 236 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC172P0C7W6 258 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 NLRP5P59047 1200 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC40Q4G0X9 1142 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 CLASP1Q7Z460 1538 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 PRAG1Q86YV5 1406 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 PLCD3Q8N3E9 789 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 SYNCQ9H7C4 482 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 GOPCQ9HD26 462 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 PHF8Q9UPP1 1060 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 NESP48681 1621 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 KIF5CO60282 957 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 GRM1Q13255 1194 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 PRPF40BQ6NWY9 871 aaKnown RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 LRSAM1Q6UWE0 723 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 SMAP1Q8IYB5 467 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 USO1O60763 962 aaKnown RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 APBB1IPQ7Z5R6 666 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms