RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TRIM5Q9C035 493 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
FN1-204ENST00000356005 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 CETN1Q12798 172 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
FN1-204ENST00000356005 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
FN1-204ENST00000356005 IQCEQ6IPM2 695 aa13.13□□□□□ -0.31
FN1-204ENST00000356005 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
FN1-204ENST00000356005 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
FN1-204ENST00000356005 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
FN1-204ENST00000356005 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 TNMDQ9H2S6 317 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 ZFYVE16Q7Z3T8 1539 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 NEFHP12036 1026 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 DNMT1P26358 1616 aaKnown RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 VPS36Q86VN1 386 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
FN1-204ENST00000356005 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
FN1-204ENST00000356005 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
FN1-204ENST00000356005 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 MX1P20591 662 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 AMPD3Q01432 767 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
FN1-204ENST00000356005 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 PLEKHH1Q9ULM0 1364 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
FN1-204ENST00000356005 FLIIQ13045 1269 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 ANKRD2Q9GZV1 360 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 IL16Q14005 1332 aa13.11□□□□□ -0.31
FN1-204ENST00000356005 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.313e-24■□□□□ 11.2
FN1-204ENST00000356005 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
FN1-204ENST00000356005 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
FN1-204ENST00000356005 FIBPO43427 364 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 GSE1Q14687 1217 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 TMTC2Q8N394 836 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
FN1-204ENST00000356005 KIF4AO95239 1232 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
FN1-204ENST00000356005 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
FN1-204ENST00000356005 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 SPATA32Q96LK8 384 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 FLT4P35916 1363 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 GNAQP50148 359 aa13.09□□□□□ -0.31
FN1-204ENST00000356005 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
FN1-204ENST00000356005 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.31
FN1-204ENST00000356005 NLRP5P59047 1200 aa13.08□□□□□ -0.31
FN1-204ENST00000356005 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.31
FN1-204ENST00000356005 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 NEO1Q92859 1461 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 NPATQ14207 1427 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 PLXNC1O60486 1568 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
FN1-204ENST00000356005 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 EMILIN1Q9Y6C2 1016 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
FN1-204ENST00000356005 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
FN1-204ENST00000356005 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
FN1-204ENST00000356005 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 SAMM50Q9Y512 469 aa13.08□□□□□ -0.32
FN1-204ENST00000356005 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
FN1-204ENST00000356005 USP37Q86T82 979 aa13.07□□□□□ -0.32
FN1-204ENST00000356005 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
FN1-204ENST00000356005 KRT23Q9C075 422 aa13.07□□□□□ -0.32
FN1-204ENST00000356005 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
FN1-204ENST00000356005 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms