RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 SRGAP3O43295 1099 aa9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 ZNF622Q969S3 477 aaKnown RBP eCLIP9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 SPECC1LQ69YQ0 1117 aa9.73□□□□□ -0.85
SH3PXD2A-202ENST00000355946 MICALCLQ6ZW33 695 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 KIAA1524Q8TCG1 905 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 PRAM1Q96QH2 718 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 TIAM1Q13009 1591 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 MSANTD4Q8NCY6 345 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 IMPG2Q9BZV3 1241 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 GAS8O95995 478 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 CCDC83Q8IWF9 413 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 PLS1Q14651 629 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 NUP62CLQ9H1M0 184 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 CCDC40Q4G0X9 1142 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 YEATS4O95619 227 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 DDX11Q96FC9 970 aa9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 JAKMIP1Q96N16 626 aaKnown RBP9.72□□□□□ -0.85
SH3PXD2A-202ENST00000355946 CACYBPQ9HB71 228 aaKnown RBP9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 GRIN2AQ12879 1464 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 PHACTR2O75167 634 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 OGFOD1Q8N543 542 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 ADAMTS2O95450 1211 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 HMGB1P09429 215 aaKnown RBP9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 SULT6B1Q6IMI4 303 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 MPNDQ8N594 471 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 EPRSP07814 1512 aaKnown RBP9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 HMGB1P1B2RPK0 211 aaPredicted RBP9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 CASTP20810 708 aaKnown RBP9.71□□□□□ -0.85
SH3PXD2A-202ENST00000355946 TMCO5BA8MYB1 307 aa9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 LDHCP07864 332 aa9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CASQ1P31415 396 aa9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 SSRP1Q08945 709 aaKnown RBP9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CDC5LQ99459 802 aaKnown RBP9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 TDRD12Q587J7 1177 aaKnown RBP9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 IFI16Q16666 785 aaKnown RBP9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CWC27Q6UX04 472 aaKnown RBP9.71□□□□□ -0.86
SH3PXD2A-202ENST00000355946 STX6O43752 255 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 SFPQP23246 707 aaKnown RBP eCLIP9.7□□□□□ -0.866e-7■■■■□ 19.6
SH3PXD2A-202ENST00000355946 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 GMNNO75496 209 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 RASAL2Q9UJF2 1139 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 RFC4P35249 363 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 MAP7D1Q3KQU3 841 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 SMC1BQ8NDV3 1235 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CDK19Q9BWU1 502 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 PAFAH1B1P43034 410 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 PSMC4P43686 418 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 IQGAP2Q13576 1575 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 A0A1W2PRG0 241 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CLIP2Q9UDT6 1046 aa9.7□□□□□ -0.86
SH3PXD2A-202ENST00000355946 PRPF4BQ13523 1007 aaKnown RBP9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 TMEM132EQ6IEE7 984 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 DAPK1P53355 1430 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 GNAT3A8MTJ3 354 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 HAUS7Q99871 368 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 PRKRIP1Q9H875 184 aaPredicted RBP9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 VIMP08670 466 aaKnown RBP9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 HAUS2Q9NVX0 235 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 DNA2P51530 1060 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 KAT14Q9H8E8 782 aa9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 MTIF2P46199 727 aaKnown RBP9.69□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 BRDTQ58F21 947 aaPredicted RBP9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 ZGPATQ8N5A5 531 aaKnown RBP9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CRCPO75575 148 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NBPF8Q3BBV2 869 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 KRT13P13646 458 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 PRPHP41219 470 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 MAP3K11Q16584 847 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 SPECC1Q5M775 1068 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 HECW1Q76N89 1606 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 NOL3O60936 208 aaKnown RBP9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
SH3PXD2A-202ENST00000355946 FAM107BQ9H098 131 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms