RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 NBPF6Q5VWK0 638 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 NBPF5PQ86XG9 351 aaPredicted RBP14.49□□□□□ -0.09
COLCA1-201ENST00000355430 NBPF4Q96M43 638 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 MYD88Q99836 296 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 USP26Q9BXU7 913 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 DBF4Q9UBU7 674 aaPredicted RBP14.49□□□□□ -0.09
COLCA1-201ENST00000355430 CCDC85AQ96PX6 553 aaPredicted RBP14.49□□□□□ -0.09
COLCA1-201ENST00000355430 PARP3Q9Y6F1 533 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 A0A0U1RQG5 324 aaPredicted RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 TSR1Q2NL82 804 aaKnown RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 BOLA2Q9H3K6 86 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 ABCC1P33527 1531 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 GPS2Q13227 327 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 C6orf229H3BNL8 230 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 IFIT5Q13325 482 aaKnown RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 SLF2Q8IX21 1173 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 PDCL2Q8N4E4 241 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 ZNF830Q96NB3 372 aaPredicted RBP14.48□□□□□ -0.09
COLCA1-201ENST00000355430 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 DNAAF4Q8WXU2 420 aa14.48□□□□□ -0.09
COLCA1-201ENST00000355430 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 USP48Q86UV5 1035 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 OTUD7AQ8TE49 926 aaPredicted RBP14.47□□□□□ -0.09
COLCA1-201ENST00000355430 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
COLCA1-201ENST00000355430 SETDB2Q96T68 719 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 CNPY2Q9Y2B0 182 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
COLCA1-201ENST00000355430 FILIP1Q7Z7B0 1213 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
COLCA1-201ENST00000355430 ANKRD18BA2A2Z9 1011 aa14.47□□□□□ -0.09
COLCA1-201ENST00000355430 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
COLCA1-201ENST00000355430 KRT32Q14532 448 aa14.46□□□□□ -0.09
COLCA1-201ENST00000355430 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
COLCA1-201ENST00000355430 CBX1P83916 185 aa14.46□□□□□ -0.09
COLCA1-201ENST00000355430 EIF4A2Q14240 407 aaKnown RBP14.46□□□□□ -0.09
COLCA1-201ENST00000355430 TSPOAP1O95153 1857 aa14.46□□□□□ -0.09
COLCA1-201ENST00000355430 RRP12Q5JTH9 1297 aaKnown RBP14.46□□□□□ -0.1
COLCA1-201ENST00000355430 ZNF772Q68DY9 489 aaPredicted RBP14.46□□□□□ -0.1
COLCA1-201ENST00000355430 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 ZSCAN22P10073 491 aaPredicted RBP14.45□□□□□ -0.1
COLCA1-201ENST00000355430 UBE2HP62256 183 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 ABCA8O94911 1581 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 GPTP24298 496 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 FKBP4Q02790 459 aaKnown RBP eCLIP14.45□□□□□ -0.1
COLCA1-201ENST00000355430 GIMAP6Q6P9H5 292 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
COLCA1-201ENST00000355430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.1
COLCA1-201ENST00000355430 UVSSAQ2YD98 709 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 ZNF287Q9HBT7 754 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 ZKSCAN5Q9Y2L8 839 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 FLT4P35916 1363 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
COLCA1-201ENST00000355430 SLC5A1P13866 664 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 CEP57L1Q8IYX8 460 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 SCAND2PQ9GZW5 306 aaPredicted RBP14.44□□□□□ -0.1
COLCA1-201ENST00000355430 CEP89Q96ST8 783 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 RHPN1Q8TCX5 695 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 RBSNQ9H1K0 784 aa14.44□□□□□ -0.1
COLCA1-201ENST00000355430 TFIP11Q9UBB9 837 aaKnown RBP14.44□□□□□ -0.1
COLCA1-201ENST00000355430 PIK3R4Q99570 1358 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 TRPM1Q7Z4N2 1603 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 DYNC1I1O14576 645 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 SERPINC1P01008 464 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ATP2B1P20020 1258 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ANKRD20A12PQ8NF67 263 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ORAI2Q96SN7 254 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ABCF2Q9UG63 623 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 NPATQ14207 1427 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ANAPC15P60006 121 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ATP8B2P98198 1209 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 CRACR2BQ8N4Y2 399 aaPredicted RBP14.43□□□□□ -0.1
COLCA1-201ENST00000355430 PCMTD1Q96MG8 357 aaPredicted RBP14.43□□□□□ -0.1
COLCA1-201ENST00000355430 NYXQ9GZU5 481 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 MYO5CQ9NQX4 1742 aa14.43□□□□□ -0.1
COLCA1-201ENST00000355430 DZIP1Q86YF9 867 aaKnown RBP14.42□□□□□ -0.1
COLCA1-201ENST00000355430 OFD1O75665 1012 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 MYO1BO43795 1136 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 EVI5LQ96CN4 794 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 CWC25Q9NXE8 425 aaPredicted RBP14.42□□□□□ -0.1
COLCA1-201ENST00000355430 CCP110O43303 1012 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 CLIP2Q9UDT6 1046 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 PLA2R1Q13018 1463 aa14.42□□□□□ -0.1
COLCA1-201ENST00000355430 FAM98CQ17RN3 349 aaKnown RBP14.41□□□□□ -0.1
COLCA1-201ENST00000355430 PI4KAP2A4QPH2 592 aa14.41□□□□□ -0.1
COLCA1-201ENST00000355430 ANXA1P04083 346 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 728.1 ms