RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MASTLQ96GX5 879 aa21.61■■□□□ 1.05
DDX55-202ENST00000354291 PANK3Q9H999 370 aa21.61■■□□□ 1.05
DDX55-202ENST00000354291 ST5P78524 1137 aa21.6■■□□□ 1.05
DDX55-202ENST00000354291 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
DDX55-202ENST00000354291 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
DDX55-202ENST00000354291 SCN11AQ9UI33 1791 aa21.6■■□□□ 1.05
DDX55-202ENST00000354291 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
DDX55-202ENST00000354291 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
DDX55-202ENST00000354291 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
DDX55-202ENST00000354291 BEGAINQ9BUH8 593 aa21.59■■□□□ 1.05
DDX55-202ENST00000354291 HMOX1P09601 288 aa21.58■■□□□ 1.05
DDX55-202ENST00000354291 GRM1Q13255 1194 aa21.58■■□□□ 1.05
DDX55-202ENST00000354291 CCDC93Q567U6 631 aa21.58■■□□□ 1.05
DDX55-202ENST00000354291 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
DDX55-202ENST00000354291 CFAP44Q96MT7 982 aa21.58■■□□□ 1.05
DDX55-202ENST00000354291 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
DDX55-202ENST00000354291 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.04
DDX55-202ENST00000354291 SLX4Q8IY92 1834 aa21.57■■□□□ 1.04
DDX55-202ENST00000354291 RGS19P49795 217 aa21.57■■□□□ 1.04
DDX55-202ENST00000354291 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
DDX55-202ENST00000354291 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
DDX55-202ENST00000354291 C7orf43Q8WVR3 580 aa21.56■■□□□ 1.04
DDX55-202ENST00000354291 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
DDX55-202ENST00000354291 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.04
DDX55-202ENST00000354291 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
DDX55-202ENST00000354291 SCN4AP35499 1836 aa21.55■■□□□ 1.04
DDX55-202ENST00000354291 A1BGP04217 495 aa21.54■■□□□ 1.04
DDX55-202ENST00000354291 IL6STP40189 918 aaPredicted RBP21.54■■□□□ 1.04
DDX55-202ENST00000354291 OLFM4Q6UX06 510 aa21.54■■□□□ 1.04
DDX55-202ENST00000354291 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
DDX55-202ENST00000354291 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
DDX55-202ENST00000354291 COL11A2P13942 1736 aaPredicted RBP21.53■■□□□ 1.04
DDX55-202ENST00000354291 CAMTA2O94983 1202 aa21.53■■□□□ 1.04
DDX55-202ENST00000354291 CAPNS2Q96L46 248 aa21.53■■□□□ 1.04
DDX55-202ENST00000354291 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
DDX55-202ENST00000354291 TSKSQ9UJT2 592 aa21.53■■□□□ 1.04
DDX55-202ENST00000354291 CYP4F22Q6NT55 531 aa21.52■■□□□ 1.04
DDX55-202ENST00000354291 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
DDX55-202ENST00000354291 MRC1P22897 1456 aa21.52■■□□□ 1.03
DDX55-202ENST00000354291 NPR1P16066 1061 aa21.51■■□□□ 1.03
DDX55-202ENST00000354291 ECE1P42892 770 aa21.51■■□□□ 1.03
DDX55-202ENST00000354291 FMR1Q06787 632 aaKnown RBP eCLIP21.51■■□□□ 1.03
DDX55-202ENST00000354291 RTKN2Q8IZC4 609 aa21.51■■□□□ 1.03
DDX55-202ENST00000354291 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
DDX55-202ENST00000354291 DZIP3Q86Y13 1208 aaKnown RBP21.5■■□□□ 1.03
DDX55-202ENST00000354291 SYNE4Q8N205 404 aa21.5■■□□□ 1.03
DDX55-202ENST00000354291 GJA3Q9Y6H8 435 aa21.5■■□□□ 1.03
DDX55-202ENST00000354291 HEG1Q9ULI3 1381 aa21.49■■□□□ 1.03
DDX55-202ENST00000354291 FZD9O00144 591 aa21.49■■□□□ 1.03
DDX55-202ENST00000354291 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
DDX55-202ENST00000354291 TEFQ10587 303 aa21.49■■□□□ 1.03
DDX55-202ENST00000354291 GPC2Q8N158 579 aa21.49■■□□□ 1.03
DDX55-202ENST00000354291 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
DDX55-202ENST00000354291 JDP2Q8WYK2 163 aa21.47■■□□□ 1.03
DDX55-202ENST00000354291 FAM177BA6PVY3 158 aa21.46■■□□□ 1.03
DDX55-202ENST00000354291 AOC2O75106 756 aa21.46■■□□□ 1.03
DDX55-202ENST00000354291 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
DDX55-202ENST00000354291 PIP4K2AP48426 406 aaPredicted RBP21.46■■□□□ 1.03
DDX55-202ENST00000354291 FMNL2Q96PY5 1086 aa21.46■■□□□ 1.03
DDX55-202ENST00000354291 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
DDX55-202ENST00000354291 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
DDX55-202ENST00000354291 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
DDX55-202ENST00000354291 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
DDX55-202ENST00000354291 TRAF5O00463 557 aa21.44■■□□□ 1.02
DDX55-202ENST00000354291 CST9Q5W186 159 aa21.44■■□□□ 1.02
DDX55-202ENST00000354291 TPTE2Q6XPS3 522 aa21.44■■□□□ 1.02
DDX55-202ENST00000354291 KLRG2A4D1S0 409 aaPredicted RBP21.43■■□□□ 1.02
DDX55-202ENST00000354291 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
DDX55-202ENST00000354291 EPS15P42566 896 aa21.43■■□□□ 1.02
DDX55-202ENST00000354291 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
DDX55-202ENST00000354291 MAP2K2P36507 400 aa21.42■■□□□ 1.02
DDX55-202ENST00000354291 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
DDX55-202ENST00000354291 ZNF652Q9Y2D9 606 aa21.42■■□□□ 1.02
DDX55-202ENST00000354291 SCN7AQ01118 1682 aa21.41■■□□□ 1.02
DDX55-202ENST00000354291 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
DDX55-202ENST00000354291 KCNQ3O43525 872 aa21.41■■□□□ 1.02
DDX55-202ENST00000354291 DIAPH1O60610 1272 aaKnown RBP21.41■■□□□ 1.02
DDX55-202ENST00000354291 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDX55-202ENST00000354291 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
DDX55-202ENST00000354291 TLL2Q9Y6L7 1015 aa21.41■■□□□ 1.02
DDX55-202ENST00000354291 GTF2E1P29083 439 aaPredicted RBP21.4■■□□□ 1.02
DDX55-202ENST00000354291 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
DDX55-202ENST00000354291 TNRC18O15417 2968 aaPredicted RBP21.4■■□□□ 1.02
DDX55-202ENST00000354291 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
DDX55-202ENST00000354291 DGKZQ13574 1117 aa21.39■■□□□ 1.01
DDX55-202ENST00000354291 SCNN1DP51172 638 aa21.38■■□□□ 1.01
DDX55-202ENST00000354291 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
DDX55-202ENST00000354291 PSMD1Q99460 953 aa21.38■■□□□ 1.01
DDX55-202ENST00000354291 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
DDX55-202ENST00000354291 BTBD11A6QL63 1104 aa21.37■■□□□ 1.01
DDX55-202ENST00000354291 CA12O43570 354 aa21.37■■□□□ 1.01
DDX55-202ENST00000354291 HSPA5P11021 654 aaKnown RBP21.37■■□□□ 1.01
DDX55-202ENST00000354291 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
DDX55-202ENST00000354291 PDE4DIPQ5VU43 2346 aa21.37■■□□□ 1.01
DDX55-202ENST00000354291 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
DDX55-202ENST00000354291 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDX55-202ENST00000354291 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
DDX55-202ENST00000354291 CELF2O95319 508 aaKnown RBP21.35■■□□□ 1.01
DDX55-202ENST00000354291 CASP8AP2Q9UKL3 1982 aa21.34■■□□□ 1.01
DDX55-202ENST00000354291 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms