RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 CASTP20810 708 aaKnown RBP21.98■■□□□ 1.11
APP-203ENST00000354192 ANKRD13DQ6ZTN6 518 aa21.98■■□□□ 1.11
APP-203ENST00000354192 HSP90AB4PQ58FF6 505 aa21.98■■□□□ 1.11
APP-203ENST00000354192 EPHA10Q5JZY3 1008 aa21.98■■□□□ 1.11
APP-203ENST00000354192 LINS1Q8NG48 757 aa21.98■■□□□ 1.11
APP-203ENST00000354192 NEUROD6Q96NK8 337 aa21.98■■□□□ 1.11
APP-203ENST00000354192 FAM227BQ96M60 508 aa21.97■■□□□ 1.11
APP-203ENST00000354192 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
APP-203ENST00000354192 SYTL4Q96C24 671 aaPredicted RBP21.97■■□□□ 1.11
APP-203ENST00000354192 EAF2Q96CJ1 260 aaPredicted RBP21.97■■□□□ 1.11
APP-203ENST00000354192 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
APP-203ENST00000354192 CHMP4AQ9BY43 222 aa21.97■■□□□ 1.11
APP-203ENST00000354192 A0A087WZG4 1122 aa21.97■■□□□ 1.11
APP-203ENST00000354192 CHGBP05060 677 aa21.97■■□□□ 1.11
APP-203ENST00000354192 IGKV5-2P06315 115 aa21.97■■□□□ 1.11
APP-203ENST00000354192 POLA2Q14181 598 aa21.97■■□□□ 1.11
APP-203ENST00000354192 ECHDC1Q9NTX5 307 aa21.97■■□□□ 1.11
APP-203ENST00000354192 RNF214Q8ND24 703 aa21.96■■□□□ 1.11
APP-203ENST00000354192 TRIM44Q96DX7 344 aaPredicted RBP21.96■■□□□ 1.11
APP-203ENST00000354192 SALL3Q9BXA9 1300 aa21.96■■□□□ 1.11
APP-203ENST00000354192 GLRX3O76003 335 aaKnown RBP21.96■■□□□ 1.11
APP-203ENST00000354192 JAKMIP1Q96N16 626 aaKnown RBP21.96■■□□□ 1.11
APP-203ENST00000354192 PTH1RQ03431 593 aa21.95■■□□□ 1.11
APP-203ENST00000354192 A1BGP04217 495 aa21.95■■□□□ 1.1
APP-203ENST00000354192 LARP1Q6PKG0 1096 aaKnown RBP21.95■■□□□ 1.1
APP-203ENST00000354192 C1orf167Q5SNV9 1468 aa21.95■■□□□ 1.1
APP-203ENST00000354192 RGPD2P0DJD1 1756 aa21.95■■□□□ 1.1
APP-203ENST00000354192 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
APP-203ENST00000354192 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
APP-203ENST00000354192 STAP2Q9UGK3 403 aa21.95■■□□□ 1.1
APP-203ENST00000354192 HOXB7P09629 217 aa21.94■■□□□ 1.1
APP-203ENST00000354192 PPFIA3O75145 1194 aa21.94■■□□□ 1.1
APP-203ENST00000354192 LTN1O94822 1766 aa21.94■■□□□ 1.1
APP-203ENST00000354192 MRE11P49959 708 aa21.93■■□□□ 1.1
APP-203ENST00000354192 NAP1L2Q9ULW6 460 aaPredicted RBP21.93■■□□□ 1.1
APP-203ENST00000354192 ZDHHC9Q9Y397 364 aa21.93■■□□□ 1.1
APP-203ENST00000354192 SGSM2O43147 1006 aa21.93■■□□□ 1.1
APP-203ENST00000354192 SASH1O94885 1247 aa21.93■■□□□ 1.1
APP-203ENST00000354192 SNRPA1P09661 255 aaKnown RBP21.93■■□□□ 1.1
APP-203ENST00000354192 KAZALD1Q96I82 304 aa21.93■■□□□ 1.1
APP-203ENST00000354192 STK3Q13188 491 aa21.92■■□□□ 1.1
APP-203ENST00000354192 PDIA6Q15084 440 aa21.92■■□□□ 1.1
APP-203ENST00000354192 SKOR2Q2VWA4 1001 aaPredicted RBP21.92■■□□□ 1.1
APP-203ENST00000354192 MPNDQ8N594 471 aa21.92■■□□□ 1.1
APP-203ENST00000354192 CCDC83Q8IWF9 413 aa21.92■■□□□ 1.1
APP-203ENST00000354192 NECAB1Q8N987 351 aa21.92■■□□□ 1.1
APP-203ENST00000354192 NSFL1CQ9UNZ2 370 aaKnown RBP21.92■■□□□ 1.1
APP-203ENST00000354192 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
APP-203ENST00000354192 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
APP-203ENST00000354192 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
APP-203ENST00000354192 NEURL1BA8MQ27 555 aa21.91■■□□□ 1.1
APP-203ENST00000354192 ADCK5Q3MIX3 580 aa21.91■■□□□ 1.1
APP-203ENST00000354192 SNX14Q9Y5W7 946 aa21.91■■□□□ 1.1
APP-203ENST00000354192 AK2P54819 239 aa21.9■■□□□ 1.1
APP-203ENST00000354192 GCKRQ14397 625 aa21.9■■□□□ 1.1
APP-203ENST00000354192 TTLL7Q6ZT98 887 aa21.9■■□□□ 1.1
APP-203ENST00000354192 ANP32BQ92688 251 aaKnown RBP21.9■■□□□ 1.1
APP-203ENST00000354192 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
APP-203ENST00000354192 RRAGDQ9NQL2 400 aaPredicted RBP21.9■■□□□ 1.1
APP-203ENST00000354192 FOSBP53539 338 aa21.9■■□□□ 1.1
APP-203ENST00000354192 SLFNL1Q499Z3 407 aa21.9■■□□□ 1.1
APP-203ENST00000354192 SYCE3A1L190 88 aa21.89■■□□□ 1.1
APP-203ENST00000354192 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.1
APP-203ENST00000354192 NMIQ13287 307 aaPredicted RBP21.89■■□□□ 1.1
APP-203ENST00000354192 LMBR1LQ6UX01 489 aa21.89■■□□□ 1.1
APP-203ENST00000354192 NFAT5O94916 1531 aa21.89■■□□□ 1.1
APP-203ENST00000354192 TFCP2Q12800 502 aa21.89■■□□□ 1.09
APP-203ENST00000354192 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.09
APP-203ENST00000354192 RUFY2Q8WXA3 655 aa21.88■■□□□ 1.09
APP-203ENST00000354192 ZNF594Q96JF6 807 aaPredicted RBP21.88■■□□□ 1.09
APP-203ENST00000354192 COL9A3Q14050 684 aaPredicted RBP21.88■■□□□ 1.09
APP-203ENST00000354192 PLCB2Q00722 1185 aa21.87■■□□□ 1.09
APP-203ENST00000354192 CCDC129Q6ZRS4 1044 aa21.87■■□□□ 1.09
APP-203ENST00000354192 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
APP-203ENST00000354192 LMBRD1Q9NUN5 540 aa21.87■■□□□ 1.09
APP-203ENST00000354192 FAM177BA6PVY3 158 aa21.87■■□□□ 1.09
APP-203ENST00000354192 FIBPO43427 364 aa21.87■■□□□ 1.09
APP-203ENST00000354192 NASPP49321 788 aaPredicted RBP21.87■■□□□ 1.09
APP-203ENST00000354192 FERMT3Q86UX7 667 aa21.87■■□□□ 1.09
APP-203ENST00000354192 FSD2A1L4K1 749 aa21.87■■□□□ 1.09
APP-203ENST00000354192 HSPA4P34932 840 aa21.87■■□□□ 1.09
APP-203ENST00000354192 FGD1P98174 961 aa21.87■■□□□ 1.09
APP-203ENST00000354192 ERC1Q8IUD2 1116 aa21.87■■□□□ 1.09
APP-203ENST00000354192 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
APP-203ENST00000354192 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
APP-203ENST00000354192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.86■■□□□ 1.09
APP-203ENST00000354192 LARGE1O95461 756 aa21.86■■□□□ 1.09
APP-203ENST00000354192 METTL22Q9BUU2 404 aaPredicted RBP21.86■■□□□ 1.09
APP-203ENST00000354192 LSG1Q9H089 658 aaKnown RBP21.86■■□□□ 1.09
APP-203ENST00000354192 HDAC5Q9UQL6 1122 aa21.86■■□□□ 1.09
APP-203ENST00000354192 A0A0D9SFI3 127 aa21.85■■□□□ 1.09
APP-203ENST00000354192 ZKSCAN1P17029 563 aaPredicted RBP21.85■■□□□ 1.09
APP-203ENST00000354192 TIMM10P62072 90 aa21.85■■□□□ 1.09
APP-203ENST00000354192 SEC62Q99442 399 aaKnown RBP21.85■■□□□ 1.09
APP-203ENST00000354192 LRRC2Q9BYS8 371 aa21.85■■□□□ 1.09
APP-203ENST00000354192 RAD50Q92878 1312 aa21.85■■□□□ 1.09
APP-203ENST00000354192 CHD2O14647 1828 aaKnown RBP21.85■■□□□ 1.09
APP-203ENST00000354192 KLHL40Q2TBA0 621 aa21.85■■□□□ 1.09
APP-203ENST00000354192 GPT2Q8TD30 523 aa21.85■■□□□ 1.09
APP-203ENST00000354192 DBNDD2Q9BQY9 259 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms