RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
DDX4-201ENST00000353507 ZNF500O60304 480 aaPredicted RBP14.58□□□□□ -0.07
DDX4-201ENST00000353507 IFIT2P09913 472 aaKnown RBP14.58□□□□□ -0.07
DDX4-201ENST00000353507 ZSCAN22P10073 491 aaPredicted RBP14.58□□□□□ -0.07
DDX4-201ENST00000353507 PSME1Q06323 249 aa14.58□□□□□ -0.07
DDX4-201ENST00000353507 HDAC5Q9UQL6 1122 aa14.58□□□□□ -0.07
DDX4-201ENST00000353507 STX6O43752 255 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 MCM5P33992 734 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 ERC1Q8IUD2 1116 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 LRRC59Q96AG4 307 aaKnown RBP14.58□□□□□ -0.08
DDX4-201ENST00000353507 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
DDX4-201ENST00000353507 ECHDC1Q9NTX5 307 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 ADGRL3Q9HAR2 1447 aa14.58□□□□□ -0.08
DDX4-201ENST00000353507 MTX1Q13505 466 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 ATP6V1DQ9Y5K8 247 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
DDX4-201ENST00000353507 TMEM87AQ8NBN3 555 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 CNPY2Q9Y2B0 182 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 NCAPD2Q15021 1401 aa14.57□□□□□ -0.08
DDX4-201ENST00000353507 GLIPR1L2Q4G1C9 344 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 TPRNQ4KMQ1 711 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 AMOTQ4VCS5 1084 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 ESCO1Q5FWF5 840 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.56□□□□□ -0.08
DDX4-201ENST00000353507 SYT1P21579 422 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 JAKMIP1Q96N16 626 aaKnown RBP14.56□□□□□ -0.08
DDX4-201ENST00000353507 CPA1P15085 419 aa14.56□□□□□ -0.08
DDX4-201ENST00000353507 PRPF40BQ6NWY9 871 aaKnown RBP14.56□□□□□ -0.08
DDX4-201ENST00000353507 R3HCC1Q9Y3T6 440 aaKnown RBP14.56□□□□□ -0.08
DDX4-201ENST00000353507 RNMTO43148 476 aaKnown RBP14.55□□□□□ -0.08
DDX4-201ENST00000353507 FIBPO43427 364 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 F13A1P00488 732 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 KSR2Q6VAB6 950 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 AACSQ86V21 672 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 CCDC83Q8IWF9 413 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 PDRG1Q9NUG6 133 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
DDX4-201ENST00000353507 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
DDX4-201ENST00000353507 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
DDX4-201ENST00000353507 KCNJ4P48050 445 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
DDX4-201ENST00000353507 CYP46A1Q9Y6A2 500 aa14.55□□□□□ -0.08
DDX4-201ENST00000353507 PXDNQ92626 1479 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 TERF1P54274 439 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 UBE2HP62256 183 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
DDX4-201ENST00000353507 ZKSCAN1P17029 563 aaPredicted RBP14.54□□□□□ -0.08
DDX4-201ENST00000353507 PTH1RQ03431 593 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 CWF19L2Q2TBE0 894 aaKnown RBP14.54□□□□□ -0.08
DDX4-201ENST00000353507 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 ZSCAN31Q96LW9 406 aaPredicted RBP14.54□□□□□ -0.08
DDX4-201ENST00000353507 HYPKQ9NX55 129 aa14.54□□□□□ -0.08
DDX4-201ENST00000353507 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
DDX4-201ENST00000353507 LARGE1O95461 756 aa14.53□□□□□ -0.08
DDX4-201ENST00000353507 GJB2P29033 226 aa14.53□□□□□ -0.08
DDX4-201ENST00000353507 PROSER3Q2NL68 480 aa14.53□□□□□ -0.08
DDX4-201ENST00000353507 SH2B1Q9NRF2 756 aaPredicted RBP14.53□□□□□ -0.08
DDX4-201ENST00000353507 OVOS2A0A0G2JMS6 1433 aa14.53□□□□□ -0.08
DDX4-201ENST00000353507 DDX58O95786 925 aaKnown RBP14.53□□□□□ -0.08
DDX4-201ENST00000353507 CCDC171Q6TFL3 1326 aa14.53□□□□□ -0.08
DDX4-201ENST00000353507 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.08
DDX4-201ENST00000353507 UVSSAQ2YD98 709 aa14.52□□□□□ -0.08
DDX4-201ENST00000353507 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.08
DDX4-201ENST00000353507 HIP1O00291 1037 aa14.52□□□□□ -0.09
DDX4-201ENST00000353507 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.09
DDX4-201ENST00000353507 GRM8O00222 908 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 LINS1Q8NG48 757 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 ZSWIM6Q9HCJ5 1215 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 VPS37CA5D8V6 355 aaPredicted RBP14.51□□□□□ -0.09
DDX4-201ENST00000353507 AIMP1Q12904 312 aaKnown RBP14.51□□□□□ -0.09
DDX4-201ENST00000353507 ANKRD24Q8TF21 1146 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 SUCLG2Q96I99 432 aa14.51□□□□□ -0.09
DDX4-201ENST00000353507 RBM8AQ9Y5S9 174 aaKnown RBP14.51□□□□□ -0.09
DDX4-201ENST00000353507 PRAMEF22A3QJZ6 481 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 GCP02774 474 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 KIAA2012Q0VF49 1180 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 ANKLE2Q86XL3 938 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 BICC1Q9H694 974 aaKnown RBP14.5□□□□□ -0.09
DDX4-201ENST00000353507 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 HCLS1P14317 486 aaPredicted RBP14.5□□□□□ -0.09
DDX4-201ENST00000353507 DDX54Q8TDD1 881 aaKnown RBP14.5□□□□□ -0.09
DDX4-201ENST00000353507 MTMR6Q9Y217 621 aa14.5□□□□□ -0.09
DDX4-201ENST00000353507 DNM1Q05193 864 aaKnown RBP14.49□□□□□ -0.09
DDX4-201ENST00000353507 NMIQ13287 307 aaPredicted RBP14.49□□□□□ -0.09
DDX4-201ENST00000353507 CREB3L3Q68CJ9 461 aa14.49□□□□□ -0.09
DDX4-201ENST00000353507 FSD1Q9BTV5 496 aa14.49□□□□□ -0.09
DDX4-201ENST00000353507 CCDC8Q9H0W5 538 aaPredicted RBP14.49□□□□□ -0.09
DDX4-201ENST00000353507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.49□□□□□ -0.09
DDX4-201ENST00000353507 PSMA5P28066 241 aa14.49□□□□□ -0.09
DDX4-201ENST00000353507 NECTIN1Q15223 517 aa14.49□□□□□ -0.09
DDX4-201ENST00000353507 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
DDX4-201ENST00000353507 KCNB2Q92953 911 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms