RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
PTPN2-203ENST00000353319 APBB1O00213 710 aa13□□□□□ -0.33
PTPN2-203ENST00000353319 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
PTPN2-203ENST00000353319 GCKRQ14397 625 aa13□□□□□ -0.33
PTPN2-203ENST00000353319 PIGBQ92521 554 aa13□□□□□ -0.33
PTPN2-203ENST00000353319 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
PTPN2-203ENST00000353319 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
PTPN2-203ENST00000353319 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
PTPN2-203ENST00000353319 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
PTPN2-203ENST00000353319 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
PTPN2-203ENST00000353319 SDSP20132 328 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 MYD88Q99836 296 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
PTPN2-203ENST00000353319 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 SLIT2O94813 1529 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 BCL9O00512 1426 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
PTPN2-203ENST00000353319 MX1P20591 662 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 BECN1Q14457 450 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
PTPN2-203ENST00000353319 ITGB4P16144 1822 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 A1BGP04217 495 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
PTPN2-203ENST00000353319 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
PTPN2-203ENST00000353319 BICC1Q9H694 974 aaKnown RBP12.96□□□□□ -0.33
PTPN2-203ENST00000353319 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
PTPN2-203ENST00000353319 H7C1W4 665 aa12.95□□□□□ -0.34
PTPN2-203ENST00000353319 STARD3NLO95772 234 aa12.95□□□□□ -0.34
PTPN2-203ENST00000353319 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-203ENST00000353319 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-203ENST00000353319 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
PTPN2-203ENST00000353319 UBAP1LF5GYI3 381 aa12.94□□□□□ -0.34
PTPN2-203ENST00000353319 CASP7P55210 303 aa12.94□□□□□ -0.34
PTPN2-203ENST00000353319 TUBGCP6Q96RT7 1819 aa12.94□□□□□ -0.34
PTPN2-203ENST00000353319 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
PTPN2-203ENST00000353319 DDB1Q16531 1140 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 TTLL7Q6ZT98 887 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 JCADQ9P266 1359 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 A0A087WZG4 1122 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-203ENST00000353319 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-203ENST00000353319 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-203ENST00000353319 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
PTPN2-203ENST00000353319 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
PTPN2-203ENST00000353319 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
PTPN2-203ENST00000353319 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN2-203ENST00000353319 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 SNX21Q969T3 373 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 ISCA1Q9BUE6 129 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 USP26Q9BXU7 913 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
PTPN2-203ENST00000353319 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-203ENST00000353319 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 REC8O95072 547 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-203ENST00000353319 RFX5P48382 616 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-203ENST00000353319 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
PTPN2-203ENST00000353319 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-203ENST00000353319 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 KIF2CQ99661 725 aa12.91□□□□□ -0.34
PTPN2-203ENST00000353319 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
PTPN2-203ENST00000353319 ERC2O15083 957 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
PTPN2-203ENST00000353319 SASH1O94885 1247 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 VPS72Q15906 364 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-203ENST00000353319 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-203ENST00000353319 BCL11AQ9H165 835 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
PTPN2-203ENST00000353319 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
PTPN2-203ENST00000353319 FOXO4P98177 505 aa12.89□□□□□ -0.35
PTPN2-203ENST00000353319 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
PTPN2-203ENST00000353319 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
PTPN2-203ENST00000353319 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
PTPN2-203ENST00000353319 CHMLP26374 656 aa12.88□□□□□ -0.35
PTPN2-203ENST00000353319 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
PTPN2-203ENST00000353319 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
PTPN2-203ENST00000353319 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
PTPN2-203ENST00000353319 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
PTPN2-203ENST00000353319 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
PTPN2-203ENST00000353319 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms