RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
SMC6-201ENST00000351948 TPM3P06753 285 aa16.22■□□□□ 0.19
SMC6-201ENST00000351948 KRT32Q14532 448 aa16.22■□□□□ 0.19
SMC6-201ENST00000351948 CRACR2BQ8N4Y2 399 aaPredicted RBP16.22■□□□□ 0.19
SMC6-201ENST00000351948 ANKRD44Q8N8A2 993 aa16.22■□□□□ 0.19
SMC6-201ENST00000351948 CFAP74Q9C0B2 1584 aa16.22■□□□□ 0.19
SMC6-201ENST00000351948 KINO60870 393 aaKnown RBP16.21■□□□□ 0.19
SMC6-201ENST00000351948 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.19
SMC6-201ENST00000351948 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
SMC6-201ENST00000351948 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
SMC6-201ENST00000351948 F8W031 263 aaPredicted RBP16.21■□□□□ 0.19
SMC6-201ENST00000351948 TPM2P07951 284 aa16.21■□□□□ 0.19
SMC6-201ENST00000351948 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
SMC6-201ENST00000351948 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.18
SMC6-201ENST00000351948 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 EVI5LQ96CN4 794 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 KCNQ3O43525 872 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
SMC6-201ENST00000351948 ALDH1L1O75891 902 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 SDSP20132 328 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 ATP2B3Q16720 1220 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 ZNF213O14771 459 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 ATP8B2P98198 1209 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 TCEANC2Q96MN5 208 aa16.2■□□□□ 0.18
SMC6-201ENST00000351948 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 ST5P78524 1137 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 NUCB1Q02818 461 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 ZNF592Q92610 1267 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 ZNF496Q96IT1 587 aaPredicted RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 TPM1P09493 284 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 SOGA3Q5TF21 947 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
SMC6-201ENST00000351948 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMC6-201ENST00000351948 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
SMC6-201ENST00000351948 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 PDE1AP54750 535 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SMC6-201ENST00000351948 BMP2KLQ5H9B9 411 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 USP21Q9UK80 565 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
SMC6-201ENST00000351948 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
SMC6-201ENST00000351948 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 MPNDQ8N594 471 aa16.18■□□□□ 0.18
SMC6-201ENST00000351948 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
SMC6-201ENST00000351948 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
SMC6-201ENST00000351948 CDK5RAP3Q96JB5 506 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
SMC6-201ENST00000351948 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 CHL1O00533 1208 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
SMC6-201ENST00000351948 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
SMC6-201ENST00000351948 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 KRT85P78386 507 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 ZHX3Q9H4I2 956 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 ARHGEF10O15013 1369 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
SMC6-201ENST00000351948 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
SMC6-201ENST00000351948 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
SMC6-201ENST00000351948 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
SMC6-201ENST00000351948 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 USP19O94966 1318 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 TFCP2Q12800 502 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
SMC6-201ENST00000351948 ZNF444Q8N0Y2 327 aaPredicted RBP16.15■□□□□ 0.18
SMC6-201ENST00000351948 CDKL5O76039 1030 aa16.14■□□□□ 0.17
SMC6-201ENST00000351948 KRT18P05783 430 aaKnown RBP16.14■□□□□ 0.17
SMC6-201ENST00000351948 SPATA32Q96LK8 384 aa16.14■□□□□ 0.17
SMC6-201ENST00000351948 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
SMC6-201ENST00000351948 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMC6-201ENST00000351948 MBD3O95983 291 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
SMC6-201ENST00000351948 TXLNAP40222 546 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
SMC6-201ENST00000351948 PDILTQ8N807 584 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
SMC6-201ENST00000351948 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
SMC6-201ENST00000351948 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 CYP7A1P22680 504 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms