RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NEK1Q96PY6 1258 aa18.65■□□□□ 0.58
PTPN11-201ENST00000351677 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.58
PTPN11-201ENST00000351677 ANKRD44Q8N8A2 993 aa18.64■□□□□ 0.58
PTPN11-201ENST00000351677 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.58
PTPN11-201ENST00000351677 ANKIB1Q9P2G1 1089 aa18.64■□□□□ 0.58
PTPN11-201ENST00000351677 POLKQ9UBT6 870 aa18.64■□□□□ 0.58
PTPN11-201ENST00000351677 ERLIN1O75477 346 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 FAM193AP78312 1265 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 SSRP1Q08945 709 aaKnown RBP18.64■□□□□ 0.57
PTPN11-201ENST00000351677 DZIP1Q86YF9 867 aaKnown RBP18.64■□□□□ 0.57
PTPN11-201ENST00000351677 NECAB1Q8N987 351 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
PTPN11-201ENST00000351677 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 BIN1O00499 593 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 TSPYL6Q8N831 410 aa18.64■□□□□ 0.57
PTPN11-201ENST00000351677 CTCFLQ8NI51 663 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-201ENST00000351677 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-201ENST00000351677 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
PTPN11-201ENST00000351677 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
PTPN11-201ENST00000351677 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
PTPN11-201ENST00000351677 SEC63Q9UGP8 760 aaKnown RBP18.63■□□□□ 0.57
PTPN11-201ENST00000351677 UBXN4Q92575 508 aa18.63■□□□□ 0.57
PTPN11-201ENST00000351677 ZSCAN23Q3MJ62 389 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 DDX19AQ9NUU7 478 aaKnown RBP18.62■□□□□ 0.57
PTPN11-201ENST00000351677 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 IQCA1Q86XH1 822 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 TCEANC2Q96MN5 208 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
PTPN11-201ENST00000351677 ADCY5O95622 1261 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
PTPN11-201ENST00000351677 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 TSPYL1Q9H0U9 437 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 TNRQ92752 1358 aa18.62■□□□□ 0.57
PTPN11-201ENST00000351677 A2MP01023 1474 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 CTAGE5O15320 804 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 RDXP35241 583 aaKnown RBP18.61■□□□□ 0.57
PTPN11-201ENST00000351677 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 TXLNBQ8N3L3 684 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 CENPHQ9H3R5 247 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 TRMT1Q9NXH9 659 aaKnown RBP18.61■□□□□ 0.57
PTPN11-201ENST00000351677 TOP1P11387 765 aaKnown RBP18.61■□□□□ 0.57
PTPN11-201ENST00000351677 ESYT1Q9BSJ8 1104 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 ERLIN2O94905 339 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 GOLGA6L10A6NI86 522 aa18.61■□□□□ 0.57
PTPN11-201ENST00000351677 ZNF287Q9HBT7 754 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 LRRC2Q9BYS8 371 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 EIF3JO75822 258 aaKnown RBP18.6■□□□□ 0.57
PTPN11-201ENST00000351677 UBE2HP62256 183 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 ISM2Q6H9L7 571 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
PTPN11-201ENST00000351677 TMEM67Q5HYA8 995 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 XAGE3Q8WTP9 111 aa18.6■□□□□ 0.57
PTPN11-201ENST00000351677 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
PTPN11-201ENST00000351677 GIMAP6Q6P9H5 292 aa18.59■□□□□ 0.57
PTPN11-201ENST00000351677 PANK2Q9BZ23 570 aa18.59■□□□□ 0.57
PTPN11-201ENST00000351677 RNF41Q9H4P4 317 aaPredicted RBP18.59■□□□□ 0.57
PTPN11-201ENST00000351677 NLRP5P59047 1200 aa18.59■□□□□ 0.57
PTPN11-201ENST00000351677 ATP8B2P98198 1209 aa18.59■□□□□ 0.57
PTPN11-201ENST00000351677 ZNF444Q8N0Y2 327 aaPredicted RBP18.59■□□□□ 0.57
PTPN11-201ENST00000351677 C16orf45Q96MC5 204 aaPredicted RBP18.59■□□□□ 0.57
PTPN11-201ENST00000351677 ASXL2Q76L83 1435 aa18.59■□□□□ 0.57
PTPN11-201ENST00000351677 EXOC5O00471 708 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 RRP9O43818 475 aaKnown RBP18.58■□□□□ 0.57
PTPN11-201ENST00000351677 VAMP4O75379 141 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 ZSCAN22P10073 491 aaPredicted RBP18.58■□□□□ 0.57
PTPN11-201ENST00000351677 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 BRF1Q92994 677 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 COPS6Q7L5N1 327 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 TMX1Q9H3N1 280 aa18.58■□□□□ 0.57
PTPN11-201ENST00000351677 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.56
PTPN11-201ENST00000351677 URI1O94763 535 aaPredicted RBP18.58■□□□□ 0.56
PTPN11-201ENST00000351677 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.56
PTPN11-201ENST00000351677 CCDC102AQ96A19 550 aa18.58■□□□□ 0.56
PTPN11-201ENST00000351677 KIF18AQ8NI77 898 aa18.58■□□□□ 0.56
PTPN11-201ENST00000351677 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
PTPN11-201ENST00000351677 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 ZNF397Q8NF99 534 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
PTPN11-201ENST00000351677 CATIPQ7Z7H3 387 aa18.57■□□□□ 0.56
PTPN11-201ENST00000351677 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 EIF2AK4Q9P2K8 1649 aaKnown RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 TNNT1P13805 278 aa18.57■□□□□ 0.56
PTPN11-201ENST00000351677 SLC4A8Q2Y0W8 1093 aa18.57■□□□□ 0.56
PTPN11-201ENST00000351677 PA2G4Q9UQ80 394 aaKnown RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 RBM8AQ9Y5S9 174 aaKnown RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 TTF1Q15361 905 aaPredicted RBP18.57■□□□□ 0.56
PTPN11-201ENST00000351677 STX1AQ16623 288 aa18.57■□□□□ 0.56
PTPN11-201ENST00000351677 ZNF165P49910 485 aa18.56■□□□□ 0.56
PTPN11-201ENST00000351677 SEC24BO95487 1268 aa18.56■□□□□ 0.56
PTPN11-201ENST00000351677 METAP2P50579 478 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPN11-201ENST00000351677 IQCEQ6IPM2 695 aa18.56■□□□□ 0.56
PTPN11-201ENST00000351677 NCOA7Q8NI08 942 aa18.56■□□□□ 0.56
PTPN11-201ENST00000351677 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms