RNA–Protein interactions for RNA: ENST00000351193.6

NMD3-201, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-201ENST00000351193 USHBP1Q8N6Y0 703 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 DACT1Q9NYF0 836 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 FOSBP53539 338 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 TNMDQ9H2S6 317 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 CEBPZQ03701 1054 aaKnown RBP9.8□□□□□ -0.84
NMD3-201ENST00000351193 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
NMD3-201ENST00000351193 FAM200AQ8TCP9 573 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 SSH3Q8TE77 659 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 FBXW7Q969H0 707 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 KIF1BPQ96EK5 621 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.8□□□□□ -0.84
NMD3-201ENST00000351193 PA2G4Q9UQ80 394 aaKnown RBP9.8□□□□□ -0.84
NMD3-201ENST00000351193 MRVI1Q9Y6F6 885 aa9.8□□□□□ -0.84
NMD3-201ENST00000351193 V9GYY5 206 aaPredicted RBP9.8□□□□□ -0.84
NMD3-201ENST00000351193 KRT85P78386 507 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 ZNF771Q7L3S4 317 aaPredicted RBP9.79□□□□□ -0.84
NMD3-201ENST00000351193 RAB11FIP3O75154 756 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 TNNT1P13805 278 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 UTP14CQ5TAP6 766 aaKnown RBP9.79□□□□□ -0.84
NMD3-201ENST00000351193 BICD2Q8TD16 824 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 CBX8Q9HC52 389 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
NMD3-201ENST00000351193 GNAT3A8MTJ3 354 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 TPD52L1Q16890 204 aaPredicted RBP9.78□□□□□ -0.84
NMD3-201ENST00000351193 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 DNAJC25Q9H1X3 360 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 A0A087WWV3 80 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 PI4KAP2A4QPH2 592 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 NPHP1O15259 732 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 PPFIA3O75145 1194 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 NCBP1Q09161 790 aaKnown RBP9.78□□□□□ -0.84
NMD3-201ENST00000351193 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 PI4KAP1Q8N8J0 262 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 SPATA32Q96LK8 384 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 FAM227BQ96M60 508 aa9.78□□□□□ -0.84
NMD3-201ENST00000351193 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.84
NMD3-201ENST00000351193 TPM3P06753 285 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 IFIT2P09913 472 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 ARID5BQ14865 1188 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 NGDNQ8NEJ9 315 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 DLC1Q96QB1 1528 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 AOX1Q06278 1338 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 VPS53Q5VIR6 699 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 LARP1Q6PKG0 1096 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 CLASRPQ8N2M8 674 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 RUFY2Q8WXA3 655 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 GTPBP4Q9BZE4 634 aaKnown RBP9.77□□□□□ -0.85
NMD3-201ENST00000351193 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 TAF6LQ9Y6J9 622 aa9.77□□□□□ -0.85
NMD3-201ENST00000351193 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 ANKRD7Q92527 254 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CCDC8Q9H0W5 538 aaPredicted RBP9.76□□□□□ -0.85
NMD3-201ENST00000351193 CLIP2Q9UDT6 1046 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 NR1I2O75469 434 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
NMD3-201ENST00000351193 ZNF165P49910 485 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CCDC144BQ3MJ40 725 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 ZSCAN25Q6NSZ9 544 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 AACSQ86V21 672 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CCDC144CPQ8IYA2 1237 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
NMD3-201ENST00000351193 CACTINQ8WUQ7 758 aaKnown RBP9.76□□□□□ -0.85
NMD3-201ENST00000351193 ZSCAN31Q96LW9 406 aaPredicted RBP9.76□□□□□ -0.85
NMD3-201ENST00000351193 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
NMD3-201ENST00000351193 NLRP6P59044 892 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 POLA2Q14181 598 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 IL17RAQ96F46 866 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 SLC26A8Q96RN1 970 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 SIL1Q9H173 461 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
NMD3-201ENST00000351193 TUBGCP6Q96RT7 1819 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 KCNQ3O43525 872 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 ZNF75DP51815 510 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 NMIQ13287 307 aaPredicted RBP9.75□□□□□ -0.85
NMD3-201ENST00000351193 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 BOLA2Q9H3K6 86 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 C9orf78Q9NZ63 289 aaPredicted RBP9.75□□□□□ -0.85
NMD3-201ENST00000351193 PEAK1Q9H792 1746 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 RIMBP3CA6NJZ7 1639 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 RIMBP3BA6NNM3 1639 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 RIMBP3Q9UFD9 1639 aa9.75□□□□□ -0.85
NMD3-201ENST00000351193 USP27XA6NNY8 438 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 CTIFO43310 598 aaKnown RBP9.74□□□□□ -0.85
NMD3-201ENST00000351193 DNAAF4Q8WXU2 420 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 ERCC4Q92889 916 aaPredicted RBP9.74□□□□□ -0.85
NMD3-201ENST00000351193 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
NMD3-201ENST00000351193 ECHDC1Q9NTX5 307 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 CGNQ9P2M7 1197 aaKnown RBP9.74□□□□□ -0.85
NMD3-201ENST00000351193 ROBO2Q9HCK4 1378 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 CEP170BQ9Y4F5 1589 aaPredicted RBP9.74□□□□□ -0.85
NMD3-201ENST00000351193 JAK2O60674 1132 aa9.74□□□□□ -0.85
NMD3-201ENST00000351193 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms