RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TNRQ92752 1358 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 DTNBO60941 627 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
CAPN3-203ENST00000349748 CAMK4Q16566 473 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 AK7Q96M32 723 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 PDRG1Q9NUG6 133 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 UBXN6Q9BZV1 441 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
CAPN3-203ENST00000349748 CUL4AQ13619 759 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 LRCH2Q5VUJ6 765 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 CWC27Q6UX04 472 aaKnown RBP12.56□□□□□ -0.4
CAPN3-203ENST00000349748 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
CAPN3-203ENST00000349748 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-203ENST00000349748 SKILP12757 684 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
CAPN3-203ENST00000349748 PLA2G4DQ86XP0 818 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
CAPN3-203ENST00000349748 SDSP20132 328 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 SUGP1Q8IWZ8 645 aaKnown RBP12.55□□□□□ -0.4
CAPN3-203ENST00000349748 PPM1EQ8WY54 764 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 SHPRHQ149N8 1683 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CAPN3-203ENST00000349748 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 MMS22LQ6ZRQ5 1243 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 RPAINQ86UA6 219 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 TYRO3Q06418 890 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 BIRC2Q13490 618 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 SCP2P22307 547 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 LEKR1Q6ZMV7 388 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
CAPN3-203ENST00000349748 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-203ENST00000349748 POLR3AO14802 1390 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-203ENST00000349748 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
CAPN3-203ENST00000349748 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 PLEKHA4Q9H4M7 779 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 APBB1O00213 710 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-203ENST00000349748 TCHHQ07283 1943 aa12.53□□□□□ -0.4
CAPN3-203ENST00000349748 H3BQF6 201 aa12.52□□□□□ -0.4
CAPN3-203ENST00000349748 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.4
CAPN3-203ENST00000349748 UBXN4Q92575 508 aa12.52□□□□□ -0.4
CAPN3-203ENST00000349748 L2HGDHQ9H9P8 463 aa12.52□□□□□ -0.4
CAPN3-203ENST00000349748 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.4
CAPN3-203ENST00000349748 CORO7P57737 925 aa12.52□□□□□ -0.41
CAPN3-203ENST00000349748 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-203ENST00000349748 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-203ENST00000349748 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
CAPN3-203ENST00000349748 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
CAPN3-203ENST00000349748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPN3-203ENST00000349748 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
CAPN3-203ENST00000349748 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
CAPN3-203ENST00000349748 IVLP07476 585 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 SLC12A5Q9H2X9 1139 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 RAI14Q9P0K7 980 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 PTPRMP28827 1452 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 AATKQ6ZMQ8 1374 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
CAPN3-203ENST00000349748 MNAT1P51948 309 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
CAPN3-203ENST00000349748 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
CAPN3-203ENST00000349748 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 PPP1R12AO14974 1030 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-203ENST00000349748 ERC2O15083 957 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 SNW1Q13573 536 aaKnown RBP12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MROH2AA6NES4 1674 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms