RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
CHRNA1-202ENST00000348749 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 FIBPO43427 364 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 SYT1P21579 422 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 HSPA4P34932 840 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 ERO1AQ96HE7 468 aa12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-202ENST00000348749 FLT4P35916 1363 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 CDC25BP30305 580 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 LRMPQ12912 555 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 TXNDC2Q86VQ3 553 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 PTPRUQ92729 1446 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 APBB1O00213 710 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 CYP2C19P33261 490 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 ZNF75DP51815 510 aa12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 TPD52L1Q16890 204 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-202ENST00000348749 TYRO3Q06418 890 aa12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 TTC14Q96N46 770 aa12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 SENP3Q9H4L4 574 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-202ENST00000348749 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 NEMFO60524 1076 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 FBXO38Q6PIJ6 1188 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 ACEP12821 1306 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 CRYBG1Q9Y4K1 1723 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 FLIIQ13045 1269 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 G2E3Q7L622 706 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 CBX8Q9HC52 389 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 LIMCH1Q9UPQ0 1083 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 USP54Q70EL1 1684 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 RAD50Q92878 1312 aa12.23□□□□□ -0.45
CHRNA1-202ENST00000348749 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 RBM43Q6ZSC3 357 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 NOL10Q9BSC4 688 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 EXOC6BQ9Y2D4 811 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 ELP1O95163 1332 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
CHRNA1-202ENST00000348749 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 MTHFSDQ2M296 383 aaKnown RBP12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 TRIM5Q9C035 493 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 MTMR6Q9Y217 621 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 ERBB3P21860 1342 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
CHRNA1-202ENST00000348749 TMEM2Q9UHN6 1383 aa12.21□□□□□ -0.46
CHRNA1-202ENST00000348749 F6X3S4 739 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 SLU7O95391 586 aaKnown RBP12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 H2AFXP16104 143 aaPredicted RBP12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 AK2P54819 239 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 ELF2Q15723 593 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 HSP90AB4PQ58FF6 505 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 ZNF446Q9NWS9 450 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 FEZ2Q9UHY8 353 aaPredicted RBP12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 MAP3K5Q99683 1374 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
CHRNA1-202ENST00000348749 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 KIF2AO00139 706 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 HNRNPH2P55795 449 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 POLA2Q14181 598 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 LRRC8AQ8IWT6 810 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms