RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 CCDC183Q5T5S1 534 aa15.52■□□□□ 0.07
DNMT3B-203ENST00000348286 USP44Q9H0E7 712 aa15.52■□□□□ 0.07
DNMT3B-203ENST00000348286 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.07
DNMT3B-203ENST00000348286 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.07
DNMT3B-203ENST00000348286 ANAPC15P60006 121 aa15.52■□□□□ 0.07
DNMT3B-203ENST00000348286 ABCC3O15438 1527 aa15.51■□□□□ 0.07
DNMT3B-203ENST00000348286 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
DNMT3B-203ENST00000348286 RNF17Q9BXT8 1623 aaKnown RBP15.51■□□□□ 0.07
DNMT3B-203ENST00000348286 MAP3K11Q16584 847 aa15.51■□□□□ 0.07
DNMT3B-203ENST00000348286 MTMR7Q9Y216 660 aa15.51■□□□□ 0.07
DNMT3B-203ENST00000348286 GPTP24298 496 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 HOMER1Q86YM7 354 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 ERICH2A1L162 156 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 LMBR1LQ6UX01 489 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 RAB11FIP4Q86YS3 637 aa15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 CCAR2Q8N163 923 aaKnown RBP15.5■□□□□ 0.07
DNMT3B-203ENST00000348286 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 ALDH1L1O75891 902 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 TPM2P07951 284 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 SAFBQ15424 915 aaKnown RBP eCLIP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 FILIP1Q7Z7B0 1213 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 ZNF830Q96NB3 372 aaPredicted RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 PALD1Q9ULE6 856 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 UQCRHLA0A096LP55 91 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 RNMTO43148 476 aaKnown RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 UQCRHP07919 91 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 HAND2P61296 217 aa15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 ZNF396Q96N95 335 aaPredicted RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 NMIQ13287 307 aaPredicted RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 TPD52L1Q16890 204 aaPredicted RBP15.49■□□□□ 0.07
DNMT3B-203ENST00000348286 METTL24Q5JXM2 366 aa15.48■□□□□ 0.07
DNMT3B-203ENST00000348286 CLCN1P35523 988 aa15.48■□□□□ 0.07
DNMT3B-203ENST00000348286 BICC1Q9H694 974 aaKnown RBP15.48■□□□□ 0.07
DNMT3B-203ENST00000348286 SMC2O95347 1197 aa15.48■□□□□ 0.07
DNMT3B-203ENST00000348286 BRF1Q92994 677 aa15.48■□□□□ 0.07
DNMT3B-203ENST00000348286 DHX16O60231 1041 aaKnown RBP15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 NEK1Q96PY6 1258 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
DNMT3B-203ENST00000348286 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 MPHOSPH8Q99549 860 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 RBSNQ9H1K0 784 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 EIF4A1P60842 406 aaKnown RBP15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 UBE2HP62256 183 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 ADCY5O95622 1261 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 SYT1P21579 422 aa15.46■□□□□ 0.07
DNMT3B-203ENST00000348286 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■□□□ 13.8
DNMT3B-203ENST00000348286 FAM173BQ6P4H8 233 aa15.46■□□□□ 0.06
DNMT3B-203ENST00000348286 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.06
DNMT3B-203ENST00000348286 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.06
DNMT3B-203ENST00000348286 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 FAM135BQ49AJ0 1406 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 FAM227BQ96M60 508 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 CTNNA3Q9UI47 895 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 HECW2Q9P2P5 1572 aa15.45■□□□□ 0.06
DNMT3B-203ENST00000348286 LMBRD1Q9NUN5 540 aa15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 SGSM2O43147 1006 aa15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 IMMTQ16891 758 aaKnown RBP15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 F13A1P00488 732 aa15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 IFIT5Q13325 482 aaKnown RBP15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 NUP133Q8WUM0 1156 aa15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
DNMT3B-203ENST00000348286 POLR1AO95602 1720 aaPredicted RBP15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 CHST3Q7LGC8 479 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 SNX14Q9Y5W7 946 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 PDILTQ8N807 584 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 EDC3Q96F86 508 aaKnown RBP15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 TTC41PQ6P2S7 1318 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 STARD3NLO95772 234 aa15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 INTS4Q96HW7 963 aaKnown RBP15.43■□□□□ 0.06
DNMT3B-203ENST00000348286 TFCP2Q12800 502 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 ABCF2Q9UG63 623 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 ZNF790Q6PG37 636 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 SUCLG2Q96I99 432 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 TPM3P06753 285 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 TIMM10P62072 90 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 LDHAL6AQ6ZMR3 332 aa15.42■□□□□ 0.06
DNMT3B-203ENST00000348286 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms