RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 FOXD4L6Q3SYB3 417 aaPredicted RBP21.69■■□□□ 1.06
KRCC1-201ENST00000347055 FOXD4L3Q6VB84 417 aaPredicted RBP21.69■■□□□ 1.06
KRCC1-201ENST00000347055 PPP1R42Q7Z4L9 355 aa21.69■■□□□ 1.06
KRCC1-201ENST00000347055 RASEFQ8IZ41 740 aa21.69■■□□□ 1.06
KRCC1-201ENST00000347055 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
KRCC1-201ENST00000347055 HIP1O00291 1037 aa21.68■■□□□ 1.06
KRCC1-201ENST00000347055 FOXO3O43524 673 aa21.68■■□□□ 1.06
KRCC1-201ENST00000347055 PPP4R3BQ5MIZ7 849 aa21.68■■□□□ 1.06
KRCC1-201ENST00000347055 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
KRCC1-201ENST00000347055 DDX19AQ9NUU7 478 aaKnown RBP21.68■■□□□ 1.06
KRCC1-201ENST00000347055 HDAC5Q9UQL6 1122 aa21.68■■□□□ 1.06
KRCC1-201ENST00000347055 MED1Q15648 1581 aaPredicted RBP21.68■■□□□ 1.06
KRCC1-201ENST00000347055 CASTP20810 708 aaKnown RBP21.67■■□□□ 1.06
KRCC1-201ENST00000347055 MTX1Q13505 466 aa21.67■■□□□ 1.06
KRCC1-201ENST00000347055 TAF7Q15545 349 aaPredicted RBP21.67■■□□□ 1.06
KRCC1-201ENST00000347055 RBM43Q6ZSC3 357 aaKnown RBP21.67■■□□□ 1.06
KRCC1-201ENST00000347055 NUTM1Q86Y26 1132 aa21.67■■□□□ 1.06
KRCC1-201ENST00000347055 GPATCH3Q96I76 525 aa21.67■■□□□ 1.06
KRCC1-201ENST00000347055 NUP62CLQ9H1M0 184 aa21.67■■□□□ 1.06
KRCC1-201ENST00000347055 IL1RAPL2Q9NP60 686 aa21.67■■□□□ 1.06
KRCC1-201ENST00000347055 DNM1Q05193 864 aaKnown RBP21.66■■□□□ 1.06
KRCC1-201ENST00000347055 SCAND2PQ9GZW5 306 aaPredicted RBP21.66■■□□□ 1.06
KRCC1-201ENST00000347055 SNRKQ9NRH2 765 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 UBR1Q8IWV7 1749 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 NWD1Q149M9 1564 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 RIOK3O14730 519 aaKnown RBP21.66■■□□□ 1.06
KRCC1-201ENST00000347055 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 ERC1Q8IUD2 1116 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 PYCARDQ9ULZ3 195 aa21.66■■□□□ 1.06
KRCC1-201ENST00000347055 SMTNL1A8MU46 457 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 ZKSCAN1P17029 563 aaPredicted RBP21.65■■□□□ 1.06
KRCC1-201ENST00000347055 PSMA5P28066 241 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 EYA1Q99502 592 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 TMEM2Q9UHN6 1383 aa21.65■■□□□ 1.06
KRCC1-201ENST00000347055 PAXBP1Q9Y5B6 917 aa21.64■■□□□ 1.06
KRCC1-201ENST00000347055 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
KRCC1-201ENST00000347055 AP5Z1O43299 807 aa21.64■■□□□ 1.05
KRCC1-201ENST00000347055 CDC25BP30305 580 aa21.64■■□□□ 1.05
KRCC1-201ENST00000347055 CCDC83Q8IWF9 413 aa21.64■■□□□ 1.05
KRCC1-201ENST00000347055 NPHP3Q7Z494 1330 aa21.63■■□□□ 1.05
KRCC1-201ENST00000347055 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
KRCC1-201ENST00000347055 SRGAP3O43295 1099 aa21.63■■□□□ 1.05
KRCC1-201ENST00000347055 TYRO3Q06418 890 aa21.63■■□□□ 1.05
KRCC1-201ENST00000347055 C17orf53Q8N3J3 647 aaPredicted RBP21.63■■□□□ 1.05
KRCC1-201ENST00000347055 TDRD7Q8NHU6 1098 aaKnown RBP21.63■■□□□ 1.05
KRCC1-201ENST00000347055 JAKMIP1Q96N16 626 aaKnown RBP21.63■■□□□ 1.05
KRCC1-201ENST00000347055 PLEKHG1Q9ULL1 1385 aa21.63■■□□□ 1.05
KRCC1-201ENST00000347055 NECTIN1Q15223 517 aa21.62■■□□□ 1.05
KRCC1-201ENST00000347055 HDGFL1Q5TGJ6 251 aa21.62■■□□□ 1.05
KRCC1-201ENST00000347055 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
KRCC1-201ENST00000347055 MRVI1Q9Y6F6 885 aa21.62■■□□□ 1.05
KRCC1-201ENST00000347055 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
KRCC1-201ENST00000347055 CWC27Q6UX04 472 aaKnown RBP21.61■■□□□ 1.05
KRCC1-201ENST00000347055 ECHDC1Q9NTX5 307 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 NEMFO60524 1076 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 LARGE1O95461 756 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 AMPHP49418 695 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 TAF3Q5VWG9 929 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 PLA2G4DQ86XP0 818 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 CLASRPQ8N2M8 674 aaKnown RBP21.61■■□□□ 1.05
KRCC1-201ENST00000347055 OGFRQ9NZT2 677 aa21.61■■□□□ 1.05
KRCC1-201ENST00000347055 CGNQ9P2M7 1197 aaKnown RBP21.6■■□□□ 1.05
KRCC1-201ENST00000347055 CEMIPQ8WUJ3 1361 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 ATP2B3Q16720 1220 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 LARP1BQ659C4 914 aaKnown RBP21.59■■□□□ 1.05
KRCC1-201ENST00000347055 TTC6Q86TZ1 520 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 CLSTN2Q9H4D0 955 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 VPS37CA5D8V6 355 aaPredicted RBP21.59■■□□□ 1.05
KRCC1-201ENST00000347055 PLCB2Q00722 1185 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 BEND3Q5T5X7 828 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 RNF20Q5VTR2 975 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 TNMDQ9H2S6 317 aa21.59■■□□□ 1.05
KRCC1-201ENST00000347055 SLIT1O75093 1534 aa21.58■■□□□ 1.05
KRCC1-201ENST00000347055 ZNF75DP51815 510 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 CBX1P83916 185 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 ST3GAL1Q11201 340 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 ME3Q16798 604 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 DNAAF4Q8WXU2 420 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 PRDM10Q9NQV6 1147 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 SPG7Q9UQ90 795 aa21.58■■□□□ 1.04
KRCC1-201ENST00000347055 TNRQ92752 1358 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 JCADQ9P266 1359 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 GABPB1Q06547 395 aaPredicted RBP21.57■■□□□ 1.04
KRCC1-201ENST00000347055 MPNDQ8N594 471 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 TSC1Q92574 1164 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 MAP4K1Q92918 833 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 HMG20BQ9P0W2 317 aa21.57■■□□□ 1.04
KRCC1-201ENST00000347055 ALDH1L1O75891 902 aa21.56■■□□□ 1.04
KRCC1-201ENST00000347055 MAP4K4O95819 1239 aaPredicted RBP21.56■■□□□ 1.04
KRCC1-201ENST00000347055 PTGS1P23219 599 aa21.56■■□□□ 1.04
KRCC1-201ENST00000347055 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
KRCC1-201ENST00000347055 SARM1Q6SZW1 724 aa21.56■■□□□ 1.04
KRCC1-201ENST00000347055 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
KRCC1-201ENST00000347055 TSGA10IPQ3SY00 556 aa21.56■■□□□ 1.04
KRCC1-201ENST00000347055 SPC24Q8NBT2 197 aa21.56■■□□□ 1.04
KRCC1-201ENST00000347055 ARID3AQ99856 593 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms