RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 USP26Q9BXU7 913 aa17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP1-202ENST00000346416 SNX21Q969T3 373 aa17.33■□□□□ 0.36
CDK5RAP1-202ENST00000346416 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 TNS2Q63HR2 1409 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 RILPL2Q969X0 211 aa17.32■□□□□ 0.36
CDK5RAP1-202ENST00000346416 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ERC2O15083 957 aa17.31■□□□□ 0.36
CDK5RAP1-202ENST00000346416 REC8O95072 547 aa17.31■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
CDK5RAP1-202ENST00000346416 A1BGP04217 495 aa17.3■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
CDK5RAP1-202ENST00000346416 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
CDK5RAP1-202ENST00000346416 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP1-202ENST00000346416 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ATP5J2-PTCD1G3V325 749 aa17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 CLASRPQ8N2M8 674 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 AFDNP55196 1824 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 PIGBQ92521 554 aa17.29■□□□□ 0.36
CDK5RAP1-202ENST00000346416 CHMLP26374 656 aa17.28■□□□□ 0.36
CDK5RAP1-202ENST00000346416 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
CDK5RAP1-202ENST00000346416 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
CDK5RAP1-202ENST00000346416 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
CDK5RAP1-202ENST00000346416 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
CDK5RAP1-202ENST00000346416 A0A087WZG4 1122 aa17.27■□□□□ 0.35
CDK5RAP1-202ENST00000346416 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.35
CDK5RAP1-202ENST00000346416 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 G3BP1Q13283 466 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 SASH1O94885 1247 aa17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ADAMTS2O95450 1211 aa17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 RABEP1Q15276 862 aa17.26■□□□□ 0.35
CDK5RAP1-202ENST00000346416 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 EXOC5O00471 708 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 MAP4K4O95819 1239 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 SIL1Q9H173 461 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ITGB4P16144 1822 aa17.25■□□□□ 0.35
CDK5RAP1-202ENST00000346416 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 COL15A1P39059 1388 aa17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 AK9Q5TCS8 1911 aa17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 CASP7P55210 303 aa17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
CDK5RAP1-202ENST00000346416 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 AACSQ86V21 672 aa17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 DNAJC10Q8IXB1 793 aa17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP1-202ENST00000346416 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 COPRSQ9NQ92 184 aa17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 BCL9O00512 1426 aa17.22■□□□□ 0.35
CDK5RAP1-202ENST00000346416 H7C1W4 665 aa17.21■□□□□ 0.35
CDK5RAP1-202ENST00000346416 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP1-202ENST00000346416 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
CDK5RAP1-202ENST00000346416 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
CDK5RAP1-202ENST00000346416 PIP4K2BP78356 416 aa17.21■□□□□ 0.35
CDK5RAP1-202ENST00000346416 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 LRP6O75581 1613 aa17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 STARD3NLO95772 234 aa17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CCDC191Q8NCU4 936 aa17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 IL25Q9H293 177 aa17.2■□□□□ 0.34
CDK5RAP1-202ENST00000346416 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 TOM1O60784 492 aa17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 DDIT3P35638 169 aa17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CDCA7Q9BWT1 371 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP1-202ENST00000346416 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP1-202ENST00000346416 FOXO4P98177 505 aa17.18■□□□□ 0.34
CDK5RAP1-202ENST00000346416 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP1-202ENST00000346416 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms