RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 ZNF219Q9P2Y4 722 aaPredicted RBP23.93■■□□□ 1.42
SLX1A-202ENST00000345535 FER1L6Q2WGJ9 1857 aa23.93■■□□□ 1.42
SLX1A-202ENST00000345535 SNRPA1P09661 255 aaKnown RBP23.92■■□□□ 1.42
SLX1A-202ENST00000345535 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
SLX1A-202ENST00000345535 PRPF40BQ6NWY9 871 aaKnown RBP23.92■■□□□ 1.42
SLX1A-202ENST00000345535 NBPF5PQ86XG9 351 aaPredicted RBP23.92■■□□□ 1.42
SLX1A-202ENST00000345535 IQCA1LA6NCM1 817 aa23.91■■□□□ 1.42
SLX1A-202ENST00000345535 COL13A1Q5TAT6 717 aaPredicted RBP23.91■■□□□ 1.42
SLX1A-202ENST00000345535 RSPH6AQ9H0K4 717 aa23.91■■□□□ 1.42
SLX1A-202ENST00000345535 TNS4Q8IZW8 715 aa23.9■■□□□ 1.42
SLX1A-202ENST00000345535 CHADLQ6NUI6 762 aa23.89■■□□□ 1.41
SLX1A-202ENST00000345535 CCDC24Q8N4L8 307 aa23.89■■□□□ 1.41
SLX1A-202ENST00000345535 PHACTR3Q96KR7 559 aa23.89■■□□□ 1.41
SLX1A-202ENST00000345535 COL11A2P13942 1736 aaPredicted RBP23.89■■□□□ 1.41
SLX1A-202ENST00000345535 POTECB2RU33 542 aa23.88■■□□□ 1.41
SLX1A-202ENST00000345535 HTATSF1O43719 755 aaKnown RBP23.88■■□□□ 1.41
SLX1A-202ENST00000345535 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
SLX1A-202ENST00000345535 TPTE2Q6XPS3 522 aa23.88■■□□□ 1.41
SLX1A-202ENST00000345535 BCORQ6W2J9 1755 aa23.88■■□□□ 1.41
SLX1A-202ENST00000345535 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
SLX1A-202ENST00000345535 NPR1P16066 1061 aa23.87■■□□□ 1.41
SLX1A-202ENST00000345535 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
SLX1A-202ENST00000345535 CREBZFQ9NS37 354 aa23.87■■□□□ 1.41
SLX1A-202ENST00000345535 HSPA1AP0DMV8 641 aaKnown RBP23.86■■□□□ 1.41
SLX1A-202ENST00000345535 HSPA1BP0DMV9 641 aaKnown RBP23.86■■□□□ 1.41
SLX1A-202ENST00000345535 USP16Q9Y5T5 823 aa23.86■■□□□ 1.41
SLX1A-202ENST00000345535 ARFGEF2Q9Y6D5 1785 aa23.86■■□□□ 1.41
SLX1A-202ENST00000345535 SLX4Q8IY92 1834 aa23.85■■□□□ 1.41
SLX1A-202ENST00000345535 KCNQ3O43525 872 aa23.85■■□□□ 1.41
SLX1A-202ENST00000345535 NEFMP07197 916 aa23.85■■□□□ 1.41
SLX1A-202ENST00000345535 DDNO94850 711 aaPredicted RBP23.83■■□□□ 1.41
SLX1A-202ENST00000345535 RTKN2Q8IZC4 609 aa23.83■■□□□ 1.41
SLX1A-202ENST00000345535 L3MBTL3Q96JM7 780 aaPredicted RBP23.83■■□□□ 1.41
SLX1A-202ENST00000345535 NIP7Q9Y221 180 aaKnown RBP eCLIP23.83■■□□□ 1.41
SLX1A-202ENST00000345535 KLRG2A4D1S0 409 aaPredicted RBP23.82■■□□□ 1.4
SLX1A-202ENST00000345535 ALDH1B1P30837 517 aa23.82■■□□□ 1.4
SLX1A-202ENST00000345535 FKBP4Q02790 459 aaKnown RBP eCLIP23.82■■□□□ 1.4
SLX1A-202ENST00000345535 MCM10Q7L590 875 aa23.82■■□□□ 1.4
SLX1A-202ENST00000345535 LDHDQ86WU2 507 aa23.82■■□□□ 1.4
SLX1A-202ENST00000345535 GTF2E1P29083 439 aaPredicted RBP23.81■■□□□ 1.4
SLX1A-202ENST00000345535 C7orf43Q8WVR3 580 aa23.81■■□□□ 1.4
SLX1A-202ENST00000345535 CACNA1SQ13698 1873 aa23.81■■□□□ 1.4
SLX1A-202ENST00000345535 SCN4AP35499 1836 aa23.8■■□□□ 1.4
SLX1A-202ENST00000345535 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
SLX1A-202ENST00000345535 PIP4K2AP48426 406 aaPredicted RBP23.79■■□□□ 1.4
SLX1A-202ENST00000345535 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
SLX1A-202ENST00000345535 NYXQ9GZU5 481 aa23.79■■□□□ 1.4
SLX1A-202ENST00000345535 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
SLX1A-202ENST00000345535 TAF1DQ9H5J8 278 aaPredicted RBP23.78■■□□□ 1.4
SLX1A-202ENST00000345535 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
SLX1A-202ENST00000345535 CC2D2BQ6DHV5 1058 aa23.76■■□□□ 1.39
SLX1A-202ENST00000345535 NBPF26B4DH59 902 aa23.75■■□□□ 1.39
SLX1A-202ENST00000345535 CAPN15O75808 1086 aa23.75■■□□□ 1.39
SLX1A-202ENST00000345535 GRIPAP1Q4V328 841 aa23.75■■□□□ 1.39
SLX1A-202ENST00000345535 NBPF10Q6P3W6 841 aaKnown RBP23.75■■□□□ 1.39
SLX1A-202ENST00000345535 PNMA8AQ86V59 439 aaPredicted RBP23.75■■□□□ 1.39
SLX1A-202ENST00000345535 NBPF15Q8N660 670 aa23.75■■□□□ 1.39
SLX1A-202ENST00000345535 MKRN1Q9UHC7 482 aaKnown RBP23.75■■□□□ 1.39
SLX1A-202ENST00000345535 HACL1Q9UJ83 578 aa23.75■■□□□ 1.39
SLX1A-202ENST00000345535 ERVV-1B6SEH8 477 aa23.74■■□□□ 1.39
SLX1A-202ENST00000345535 ZNF277Q9NRM2 450 aaPredicted RBP23.74■■□□□ 1.39
SLX1A-202ENST00000345535 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
SLX1A-202ENST00000345535 JDP2Q8WYK2 163 aa23.73■■□□□ 1.39
SLX1A-202ENST00000345535 CNTNAP1P78357 1384 aa23.73■■□□□ 1.39
SLX1A-202ENST00000345535 TMEM88BA6NKF7 163 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 FAM177BA6PVY3 158 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 POTEIP0CG38 1075 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 POTEJP0CG39 1038 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 IARSP41252 1262 aaKnown RBP23.72■■□□□ 1.39
SLX1A-202ENST00000345535 EAPPQ56P03 285 aaPredicted RBP23.72■■□□□ 1.39
SLX1A-202ENST00000345535 KIF6Q6ZMV9 814 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 PSMD1Q99460 953 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 PNNQ9H307 717 aaKnown RBP23.72■■□□□ 1.39
SLX1A-202ENST00000345535 CLEC11AQ9Y240 323 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 PASKQ96RG2 1323 aa23.72■■□□□ 1.39
SLX1A-202ENST00000345535 GPC2Q8N158 579 aa23.71■■□□□ 1.39
SLX1A-202ENST00000345535 AIDAQ96BJ3 306 aa23.71■■□□□ 1.39
SLX1A-202ENST00000345535 EPHX2P34913 555 aa23.7■■□□□ 1.38
SLX1A-202ENST00000345535 CRY2Q49AN0 593 aa23.7■■□□□ 1.38
SLX1A-202ENST00000345535 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
SLX1A-202ENST00000345535 RPGRQ92834 1020 aaKnown RBP23.7■■□□□ 1.38
SLX1A-202ENST00000345535 LAMB4A4D0S4 1761 aa23.7■■□□□ 1.38
SLX1A-202ENST00000345535 IBTKQ9P2D0 1353 aaPredicted RBP23.69■■□□□ 1.38
SLX1A-202ENST00000345535 MAP3K15Q6ZN16 1313 aa23.69■■□□□ 1.38
SLX1A-202ENST00000345535 ZNF541Q9H0D2 1346 aa23.69■■□□□ 1.38
SLX1A-202ENST00000345535 FZD9O00144 591 aa23.69■■□□□ 1.38
SLX1A-202ENST00000345535 HLFQ16534 295 aa23.69■■□□□ 1.38
SLX1A-202ENST00000345535 EIF6P56537 245 aaKnown RBP23.68■■□□□ 1.38
SLX1A-202ENST00000345535 TMX4Q9H1E5 349 aaPredicted RBP23.68■■□□□ 1.38
SLX1A-202ENST00000345535 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
SLX1A-202ENST00000345535 PRDM10Q9NQV6 1147 aa23.67■■□□□ 1.38
SLX1A-202ENST00000345535 ITGBL1O95965 494 aaPredicted RBP23.66■■□□□ 1.38
SLX1A-202ENST00000345535 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
SLX1A-202ENST00000345535 NGEFQ8N5V2 710 aa23.66■■□□□ 1.38
SLX1A-202ENST00000345535 ERBB4Q15303 1308 aa23.65■■□□□ 1.38
SLX1A-202ENST00000345535 HOXA10P31260 410 aaPredicted RBP23.65■■□□□ 1.38
SLX1A-202ENST00000345535 CTCFP49711 727 aaPredicted RBP23.65■■□□□ 1.38
SLX1A-202ENST00000345535 MIS18AQ9NYP9 233 aa23.65■■□□□ 1.38
SLX1A-202ENST00000345535 RRP7AQ9Y3A4 280 aaKnown RBP23.65■■□□□ 1.38
SLX1A-202ENST00000345535 RNF123Q5XPI4 1314 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms