RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.65
CPSF4L-201ENST00000344935 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 C7orf43Q8WVR3 580 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 MASTLQ96GX5 879 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
CPSF4L-201ENST00000344935 C21orf2O43822 256 aa11□□□□□ -0.65
CPSF4L-201ENST00000344935 CHADLQ6NUI6 762 aa11□□□□□ -0.65
CPSF4L-201ENST00000344935 PASKQ96RG2 1323 aa11□□□□□ -0.65
CPSF4L-201ENST00000344935 CNTNAP1P78357 1384 aa11□□□□□ -0.65
CPSF4L-201ENST00000344935 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 NPR1P16066 1061 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 TNS4Q8IZW8 715 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 ZNF622Q969S3 477 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
CPSF4L-201ENST00000344935 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
CPSF4L-201ENST00000344935 A1BGP04217 495 aa10.98□□□□□ -0.65
CPSF4L-201ENST00000344935 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
CPSF4L-201ENST00000344935 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
CPSF4L-201ENST00000344935 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
CPSF4L-201ENST00000344935 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 PRKAR2BP31323 418 aa10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 CRY2Q49AN0 593 aa10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 ANKRD36CQ5JPF3 1778 aa10.97□□□□□ -0.65
CPSF4L-201ENST00000344935 GRIPAP1Q4V328 841 aa10.96□□□□□ -0.65
CPSF4L-201ENST00000344935 RTKN2Q8IZC4 609 aa10.96□□□□□ -0.65
CPSF4L-201ENST00000344935 PSMD1Q99460 953 aa10.96□□□□□ -0.65
CPSF4L-201ENST00000344935 TAF1DQ9H5J8 278 aaPredicted RBP10.96□□□□□ -0.65
CPSF4L-201ENST00000344935 LTBP1Q14766 1721 aa10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 DDNO94850 711 aaPredicted RBP10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 USP16Q9Y5T5 823 aa10.95□□□□□ -0.66
CPSF4L-201ENST00000344935 NBPF26B4DH59 902 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 FZD9O00144 591 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 NPHP1O15259 732 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 KCNQ3O43525 872 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 ITGBL1O95965 494 aaPredicted RBP10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 NBPF15Q8N660 670 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 RTF1Q92541 710 aaKnown RBP10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 LAMB2P55268 1798 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 LRRC37AA6NMS7 1700 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 COL4A5P29400 1685 aa10.94□□□□□ -0.66
CPSF4L-201ENST00000344935 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 ALDH1B1P30837 517 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 HOXA10P31260 410 aaPredicted RBP10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 GPC2Q8N158 579 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
CPSF4L-201ENST00000344935 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 NIP7Q9Y221 180 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF4L-201ENST00000344935 RNF123Q5XPI4 1314 aa10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 IARSP41252 1262 aaKnown RBP10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
CPSF4L-201ENST00000344935 MAP3K15Q6ZN16 1313 aa10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 EPHX2P34913 555 aa10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 CTCFP49711 727 aaPredicted RBP10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 MCM10Q7L590 875 aa10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 MKRN1Q9UHC7 482 aaKnown RBP10.9□□□□□ -0.66
CPSF4L-201ENST00000344935 CDHR2Q9BYE9 1310 aa10.89□□□□□ -0.67
CPSF4L-201ENST00000344935 FOXN1O15353 648 aa10.89□□□□□ -0.67
CPSF4L-201ENST00000344935 ZNF277Q9NRM2 450 aaPredicted RBP10.89□□□□□ -0.67
CPSF4L-201ENST00000344935 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
CPSF4L-201ENST00000344935 VEGFBP49765 207 aa10.88□□□□□ -0.67
CPSF4L-201ENST00000344935 HLFQ16534 295 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms