RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 CCDC112Q8NEF3 446 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 TWISTNBQ3B726 338 aaPredicted RBP10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 C1orf115Q9H7X2 142 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 YY1AP1Q9H869 796 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 RSPH14Q9UHP6 348 aa10.77□□□□□ -0.69
AC008543.1-201ENST00000344893 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 KCNQ3O43525 872 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 TPM3P06753 285 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 MST1RQ04912 1400 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 AP5Z1O43299 807 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 TNNT1P13805 278 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 CYP2C19P33261 490 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 ZNF397Q8NF99 534 aaPredicted RBP10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 GEMIN8Q9NWZ8 242 aaKnown RBP10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 OVOS2A0A0J9YW53 1432 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 OVOS2Q6IE36 1432 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 TOM1O60784 492 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 BRD1O95696 1058 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 NOL10Q9BSC4 688 aaKnown RBP10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
AC008543.1-201ENST00000344893 SPATA31A3Q5VYP0 1347 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 GNAT3A8MTJ3 354 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 GOLGA6L6A8MZA4 724 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 ANKARQ7Z5J8 1434 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 GSPT1P15170 499 aaKnown RBP10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 MMP14P50281 582 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 FAM193AP78312 1265 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 MEX3CQ5U5Q3 659 aaKnown RBP10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
AC008543.1-201ENST00000344893 TATP17735 454 aaPredicted RBP10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 PTGS1P23219 599 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 CCDC183Q5T5S1 534 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 USP48Q86UV5 1035 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 GCC1Q96CN9 775 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 V9GYY5 206 aaPredicted RBP10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 USP32Q8NFA0 1604 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 CHD2O14647 1828 aaKnown RBP10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 GNAI1P63096 354 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 CCDC27Q2M243 656 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 F6X3S4 739 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 PAXBP1Q9Y5B6 917 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
AC008543.1-201ENST00000344893 APPP05067 770 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 PSEN1P49768 467 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 LMOD3Q0VAK6 560 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 PLEKHO1Q53GL0 409 aaPredicted RBP10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 IL17REQ8NFR9 667 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 RASSF4Q9H2L5 321 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 ITSN1Q15811 1721 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 XRN1Q8IZH2 1706 aaKnown RBP10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 FBXO38Q6PIJ6 1188 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 IQSEC2Q5JU85 1478 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 GTF2A1P52655 376 aaPredicted RBP10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 TMX3Q96JJ7 454 aa10.73□□□□□ -0.69
AC008543.1-201ENST00000344893 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 PRAMEF22A3QJZ6 481 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 LRMPQ12912 555 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 NFATC2IPQ8NCF5 419 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 DHX16O60231 1041 aaKnown RBP10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 MX1P20591 662 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 ACSBG1Q96GR2 724 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 PNPLA6Q8IY17 1366 aa10.72□□□□□ -0.69
AC008543.1-201ENST00000344893 BTBD11A6QL63 1104 aa10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 MYL6BP14649 208 aa10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 KIF1BPQ96EK5 621 aa10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 ZNF215Q9UL58 517 aaPredicted RBP10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 ERBB3P21860 1342 aa10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 ZNF142P52746 1687 aaPredicted RBP10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 INTS3Q68E01 1043 aaKnown RBP10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 GTF3C6Q969F1 213 aa10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.71□□□□□ -0.69
AC008543.1-201ENST00000344893 TPD52L1Q16890 204 aaPredicted RBP10.71□□□□□ -0.7
AC008543.1-201ENST00000344893 GIMAP6Q6P9H5 292 aa10.71□□□□□ -0.7
AC008543.1-201ENST00000344893 NEK4P51957 841 aa10.7□□□□□ -0.7
AC008543.1-201ENST00000344893 ELF2Q15723 593 aa10.7□□□□□ -0.7
AC008543.1-201ENST00000344893 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
AC008543.1-201ENST00000344893 CCDC186Q7Z3E2 898 aa10.7□□□□□ -0.7
AC008543.1-201ENST00000344893 C10orf67Q8IYJ2 551 aa10.7□□□□□ -0.7
AC008543.1-201ENST00000344893 NEK11Q8NG66 645 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms