RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 GNAI3P08754 354 aa17.36■□□□□ 0.37
MS4A4A-202ENST00000343968 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
MS4A4A-202ENST00000343968 MEIS3Q99687 375 aa17.36■□□□□ 0.37
MS4A4A-202ENST00000343968 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
MS4A4A-202ENST00000343968 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 CRKLP46109 303 aaKnown RBP17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
MS4A4A-202ENST00000343968 MYH14Q7Z406 1995 aaKnown RBP17.34■□□□□ 0.37
MS4A4A-202ENST00000343968 TTLL7Q6ZT98 887 aa17.34■□□□□ 0.37
MS4A4A-202ENST00000343968 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.37
MS4A4A-202ENST00000343968 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.37
MS4A4A-202ENST00000343968 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.37
MS4A4A-202ENST00000343968 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.36
MS4A4A-202ENST00000343968 UTYO14607 1347 aa17.33■□□□□ 0.36
MS4A4A-202ENST00000343968 IGHDP01880 384 aa17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 IGKV5-2P06315 115 aa17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 MAP3K15Q6ZN16 1313 aa17.32■□□□□ 0.36
MS4A4A-202ENST00000343968 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
MS4A4A-202ENST00000343968 TRIM37O94972 964 aa17.31■□□□□ 0.36
MS4A4A-202ENST00000343968 GNAI2P04899 355 aa17.31■□□□□ 0.36
MS4A4A-202ENST00000343968 SLC27A3Q5K4L6 730 aa17.31■□□□□ 0.36
MS4A4A-202ENST00000343968 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
MS4A4A-202ENST00000343968 PLSCR1O15162 318 aa17.3■□□□□ 0.36
MS4A4A-202ENST00000343968 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
MS4A4A-202ENST00000343968 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
MS4A4A-202ENST00000343968 MYD88Q99836 296 aa17.3■□□□□ 0.36
MS4A4A-202ENST00000343968 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
MS4A4A-202ENST00000343968 RGL2O15211 777 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 COL15A1P39059 1388 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 TCIRG1Q13488 830 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 GCKRQ14397 625 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 CWF19L2Q2TBE0 894 aaKnown RBP17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 SIRT2Q8IXJ6 389 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
MS4A4A-202ENST00000343968 GRM8O00222 908 aa17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 HSP90AB3PQ58FF7 597 aa17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
MS4A4A-202ENST00000343968 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 A0A087WZG4 1122 aa17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 RPS6KA4O75676 772 aa17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
MS4A4A-202ENST00000343968 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.35
MS4A4A-202ENST00000343968 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 NUP98P52948 1817 aa17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 ATP8B2P98198 1209 aa17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 BCORQ6W2J9 1755 aa17.26■□□□□ 0.35
MS4A4A-202ENST00000343968 KCNQ4P56696 695 aa17.25■□□□□ 0.35
MS4A4A-202ENST00000343968 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
MS4A4A-202ENST00000343968 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
MS4A4A-202ENST00000343968 H7C1W4 665 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 CASP7P55210 303 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 MTX1Q13505 466 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 HLFQ16534 295 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
MS4A4A-202ENST00000343968 ATP5J2-PTCD1G3V325 749 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 HMMRO75330 724 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 PROM2Q8N271 834 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
MS4A4A-202ENST00000343968 EP400Q96L91 3159 aa17.22■□□□□ 0.35
MS4A4A-202ENST00000343968 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
MS4A4A-202ENST00000343968 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
MS4A4A-202ENST00000343968 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
MS4A4A-202ENST00000343968 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
MS4A4A-202ENST00000343968 APBA3O96018 575 aa17.21■□□□□ 0.35
MS4A4A-202ENST00000343968 ADRA2BP18089 450 aa17.21■□□□□ 0.35
MS4A4A-202ENST00000343968 POLA2Q14181 598 aa17.21■□□□□ 0.35
MS4A4A-202ENST00000343968 UBR3Q6ZT12 1888 aa17.21■□□□□ 0.34
MS4A4A-202ENST00000343968 SUCLG2Q96I99 432 aa17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 GNPATO15228 680 aa17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms