RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 NR1I2O75469 434 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 FLIIQ13045 1269 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 SPATA32Q96LK8 384 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 PAXBP1Q9Y5B6 917 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 PTPN14Q15678 1187 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 HSP90AB2PQ58FF8 381 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
CLCN1-201ENST00000343257 MAP2P11137 1827 aaKnown RBP17.62■□□□□ 0.41
CLCN1-201ENST00000343257 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
CLCN1-201ENST00000343257 GNAI3P08754 354 aa17.62■□□□□ 0.41
CLCN1-201ENST00000343257 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
CLCN1-201ENST00000343257 ERCC4Q92889 916 aaPredicted RBP17.62■□□□□ 0.41
CLCN1-201ENST00000343257 ZBTB9Q96C00 473 aa17.62■□□□□ 0.41
CLCN1-201ENST00000343257 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
CLCN1-201ENST00000343257 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
CLCN1-201ENST00000343257 GORABQ5T7V8 394 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 ZNF397Q8NF99 534 aaPredicted RBP17.61■□□□□ 0.41
CLCN1-201ENST00000343257 SKILP12757 684 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 CCDC66A2RUB6 948 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 TIGD1Q96MW7 591 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
CLCN1-201ENST00000343257 RBM6P78332 1123 aaKnown RBP17.6■□□□□ 0.41
CLCN1-201ENST00000343257 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
CLCN1-201ENST00000343257 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
CLCN1-201ENST00000343257 GOLGA6L19H0YKK7 550 aa17.6■□□□□ 0.41
CLCN1-201ENST00000343257 PPFIA3O75145 1194 aa17.6■□□□□ 0.41
CLCN1-201ENST00000343257 RAPGEF3O95398 923 aa17.6■□□□□ 0.41
CLCN1-201ENST00000343257 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
CLCN1-201ENST00000343257 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 PTPRMP28827 1452 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 SSH2Q76I76 1423 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 SRGAP3O43295 1099 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 LRRN4CLQ8ND94 238 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 LARP1Q6PKG0 1096 aaKnown RBP17.59■□□□□ 0.41
CLCN1-201ENST00000343257 LRRC8AQ8IWT6 810 aa17.59■□□□□ 0.41
CLCN1-201ENST00000343257 ERCC6LQ2NKX8 1250 aa17.58■□□□□ 0.4
CLCN1-201ENST00000343257 POLR3GO15318 223 aaPredicted RBP17.58■□□□□ 0.4
CLCN1-201ENST00000343257 RAB11FIP3O75154 756 aa17.58■□□□□ 0.4
CLCN1-201ENST00000343257 USP44Q9H0E7 712 aa17.58■□□□□ 0.4
CLCN1-201ENST00000343257 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
CLCN1-201ENST00000343257 C11orf57Q6ZUT1 292 aaPredicted RBP17.57■□□□□ 0.4
CLCN1-201ENST00000343257 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
CLCN1-201ENST00000343257 SYCP1Q15431 976 aa17.57■□□□□ 0.4
CLCN1-201ENST00000343257 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
CLCN1-201ENST00000343257 SOS1Q07889 1333 aaPredicted RBP17.57■□□□□ 0.4
CLCN1-201ENST00000343257 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
CLCN1-201ENST00000343257 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
CLCN1-201ENST00000343257 ZNF446Q9NWS9 450 aa17.56■□□□□ 0.4
CLCN1-201ENST00000343257 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
CLCN1-201ENST00000343257 BECN2A8MW95 431 aa17.56■□□□□ 0.4
CLCN1-201ENST00000343257 CERS3Q8IU89 383 aa17.56■□□□□ 0.4
CLCN1-201ENST00000343257 LEO1Q8WVC0 666 aaPredicted RBP17.56■□□□□ 0.4
CLCN1-201ENST00000343257 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 CHD1O14646 1710 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
CLCN1-201ENST00000343257 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 NOL10Q9BSC4 688 aaKnown RBP17.55■□□□□ 0.4
CLCN1-201ENST00000343257 CAPN2P17655 700 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
CLCN1-201ENST00000343257 CLSTN2Q9H4D0 955 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 TAF6LQ9Y6J9 622 aa17.55■□□□□ 0.4
CLCN1-201ENST00000343257 TRIM34Q9BYJ4 488 aa17.54■□□□□ 0.4
CLCN1-201ENST00000343257 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
CLCN1-201ENST00000343257 NUDT16Q96DE0 195 aaKnown RBP17.54■□□□□ 0.4
CLCN1-201ENST00000343257 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLCN1-201ENST00000343257 JAK2O60674 1132 aa17.53■□□□□ 0.4
CLCN1-201ENST00000343257 HNRNPH2P55795 449 aaKnown RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 ZFP91Q96JP5 570 aaPredicted RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
CLCN1-201ENST00000343257 SLU7O95391 586 aaKnown RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 NBPF7P0C2Y1 421 aaPredicted RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 RBM8AQ9Y5S9 174 aaKnown RBP17.53■□□□□ 0.4
CLCN1-201ENST00000343257 ANKRD26Q9UPS8 1709 aa17.53■□□□□ 0.4
CLCN1-201ENST00000343257 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.4
CLCN1-201ENST00000343257 SYT10Q6XYQ8 523 aa17.52■□□□□ 0.4
CLCN1-201ENST00000343257 NEK11Q8NG66 645 aa17.52■□□□□ 0.4
CLCN1-201ENST00000343257 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
CLCN1-201ENST00000343257 ANXA1P04083 346 aa17.52■□□□□ 0.4
CLCN1-201ENST00000343257 ERO1AQ96HE7 468 aa17.52■□□□□ 0.4
CLCN1-201ENST00000343257 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.39
CLCN1-201ENST00000343257 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.39
CLCN1-201ENST00000343257 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.51■□□□□ 0.39
CLCN1-201ENST00000343257 IL17RAQ96F46 866 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 LMTK2Q8IWU2 1503 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 CREB3L3Q68CJ9 461 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
CLCN1-201ENST00000343257 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
CLCN1-201ENST00000343257 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
CLCN1-201ENST00000343257 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 CCAR2Q8N163 923 aaKnown RBP17.5■□□□□ 0.39
CLCN1-201ENST00000343257 IPO4Q8TEX9 1081 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms