RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 PLEKHM2Q8IWE5 1019 aa23.52■■□□□ 1.36
SOX12-201ENST00000342665 ANKRD18BA2A2Z9 1011 aa23.51■■□□□ 1.35
SOX12-201ENST00000342665 GRM8O00222 908 aa23.51■■□□□ 1.35
SOX12-201ENST00000342665 GUCY1B3Q02153 619 aa23.5■■□□□ 1.35
SOX12-201ENST00000342665 EYA1Q99502 592 aa23.5■■□□□ 1.35
SOX12-201ENST00000342665 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
SOX12-201ENST00000342665 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
SOX12-201ENST00000342665 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
SOX12-201ENST00000342665 CFAP100Q494V2 611 aa23.5■■□□□ 1.35
SOX12-201ENST00000342665 CKAP2LQ8IYA6 745 aa23.49■■□□□ 1.35
SOX12-201ENST00000342665 LDHAL6AQ6ZMR3 332 aa23.49■■□□□ 1.35
SOX12-201ENST00000342665 LINS1Q8NG48 757 aa23.49■■□□□ 1.35
SOX12-201ENST00000342665 CCT2P78371 535 aaKnown RBP23.49■■□□□ 1.35
SOX12-201ENST00000342665 COPS6Q7L5N1 327 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 KRT18P05783 430 aaKnown RBP23.48■■□□□ 1.35
SOX12-201ENST00000342665 ZSCAN22P10073 491 aaPredicted RBP23.48■■□□□ 1.35
SOX12-201ENST00000342665 SFPQP23246 707 aaKnown RBP eCLIP23.48■■□□□ 1.35
SOX12-201ENST00000342665 XAGE3Q8WTP9 111 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 TRIM35Q9UPQ4 493 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 MINDY4BA8MYZ0 360 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 ATP2B2Q01814 1243 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 CAVIN4Q5BKX8 364 aa23.48■■□□□ 1.35
SOX12-201ENST00000342665 RRP9O43818 475 aaKnown RBP23.47■■□□□ 1.35
SOX12-201ENST00000342665 MCM5P33992 734 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 ZSCAN23Q3MJ62 389 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 RBM27Q9P2N5 1060 aaKnown RBP23.47■■□□□ 1.35
SOX12-201ENST00000342665 PBRM1Q86U86 1689 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 PTPRTO14522 1441 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 SOS1Q07889 1333 aaPredicted RBP23.47■■□□□ 1.35
SOX12-201ENST00000342665 MAP3K19Q56UN5 1328 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 GOLGA8BA8MQT2 603 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 SLC5A1P13866 664 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 BICDL1Q6ZP65 573 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 KIF2AO00139 706 aaPredicted RBP23.47■■□□□ 1.35
SOX12-201ENST00000342665 CDR1P51861 262 aa23.47■■□□□ 1.35
SOX12-201ENST00000342665 XRCC6P12956 609 aaKnown RBP eCLIP23.46■■□□□ 1.35
SOX12-201ENST00000342665 IL13P35225 146 aa23.46■■□□□ 1.35
SOX12-201ENST00000342665 UVSSAQ2YD98 709 aa23.46■■□□□ 1.35
SOX12-201ENST00000342665 SNRKQ9NRH2 765 aa23.46■■□□□ 1.35
SOX12-201ENST00000342665 FAM177A1Q8N128 213 aaPredicted RBP23.46■■□□□ 1.35
SOX12-201ENST00000342665 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
SOX12-201ENST00000342665 RNF41Q9H4P4 317 aaPredicted RBP23.45■■□□□ 1.35
SOX12-201ENST00000342665 SETQ01105 290 aaPredicted RBP23.45■■□□□ 1.34
SOX12-201ENST00000342665 CHRNA2Q15822 529 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 RBM8AQ9Y5S9 174 aaKnown RBP23.45■■□□□ 1.34
SOX12-201ENST00000342665 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 GPTP24298 496 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 RAB3GAP1Q15042 981 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 FSIP1Q8NA03 581 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 CT47A1Q5JQC4 288 aaPredicted RBP23.45■■□□□ 1.34
SOX12-201ENST00000342665 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 SLC12A7Q9Y666 1083 aa23.45■■□□□ 1.34
SOX12-201ENST00000342665 CAVIN2O95810 425 aa23.44■■□□□ 1.34
SOX12-201ENST00000342665 USP16Q9Y5T5 823 aa23.44■■□□□ 1.34
SOX12-201ENST00000342665 TTF1Q15361 905 aaPredicted RBP23.44■■□□□ 1.34
SOX12-201ENST00000342665 TTC41PQ6P2S7 1318 aa23.44■■□□□ 1.34
SOX12-201ENST00000342665 IFIT3O14879 490 aaKnown RBP23.44■■□□□ 1.34
SOX12-201ENST00000342665 JARID2Q92833 1246 aaPredicted RBP23.44■■□□□ 1.34
SOX12-201ENST00000342665 DDX46Q7L014 1031 aaKnown RBP23.43■■□□□ 1.34
SOX12-201ENST00000342665 IQCA1Q86XH1 822 aa23.43■■□□□ 1.34
SOX12-201ENST00000342665 ZSCAN16Q9H4T2 348 aaPredicted RBP23.43■■□□□ 1.34
SOX12-201ENST00000342665 LUC7LQ9NQ29 371 aaKnown RBP23.43■■□□□ 1.34
SOX12-201ENST00000342665 ZNF165P49910 485 aa23.43■■□□□ 1.34
SOX12-201ENST00000342665 PTPN14Q15678 1187 aa23.43■■□□□ 1.34
SOX12-201ENST00000342665 EXOC5O00471 708 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 SLC39A6Q13433 755 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 BRF1Q92994 677 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 ORC3Q9UBD5 711 aaPredicted RBP23.42■■□□□ 1.34
SOX12-201ENST00000342665 TBX22Q9Y458 520 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 NECAB1Q8N987 351 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 CTCFLQ8NI51 663 aaPredicted RBP23.42■■□□□ 1.34
SOX12-201ENST00000342665 RBM25P49756 843 aaKnown RBP23.42■■□□□ 1.34
SOX12-201ENST00000342665 USP26Q9BXU7 913 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 BMP2KQ9NSY1 1161 aaPredicted RBP23.42■■□□□ 1.34
SOX12-201ENST00000342665 CLIP2Q9UDT6 1046 aa23.42■■□□□ 1.34
SOX12-201ENST00000342665 ADCY5O95622 1261 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 ZNF287Q9HBT7 754 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 EDC4Q6P2E9 1401 aaKnown RBP23.41■■□□□ 1.34
SOX12-201ENST00000342665 GOLGA8AA7E2F4 631 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 CHL1O00533 1208 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 CCDC82Q8N4S0 544 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
SOX12-201ENST00000342665 PIBF1Q8WXW3 757 aa23.4■■□□□ 1.34
SOX12-201ENST00000342665 HCLS1P14317 486 aaPredicted RBP23.4■■□□□ 1.34
SOX12-201ENST00000342665 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
SOX12-201ENST00000342665 ZFYP08048 801 aaPredicted RBP23.4■■□□□ 1.34
SOX12-201ENST00000342665 DEF6Q9H4E7 631 aa23.4■■□□□ 1.34
SOX12-201ENST00000342665 NCOA7Q8NI08 942 aa23.4■■□□□ 1.34
SOX12-201ENST00000342665 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
SOX12-201ENST00000342665 CHMLP26374 656 aa23.39■■□□□ 1.34
SOX12-201ENST00000342665 IARSP41252 1262 aaKnown RBP23.39■■□□□ 1.34
SOX12-201ENST00000342665 HAND2P61296 217 aa23.39■■□□□ 1.34
SOX12-201ENST00000342665 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
SOX12-201ENST00000342665 NEMFO60524 1076 aa23.39■■□□□ 1.33
SOX12-201ENST00000342665 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
SOX12-201ENST00000342665 INTS4Q96HW7 963 aaKnown RBP23.39■■□□□ 1.33
SOX12-201ENST00000342665 TRPM2O94759 1503 aa23.39■■□□□ 1.33
SOX12-201ENST00000342665 TCEANC2Q96MN5 208 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms