RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 DBF4Q9UBU7 674 aaPredicted RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 FKBP4Q02790 459 aaKnown RBP eCLIP14.98□□□□□ -0.01
LMX1A-202ENST00000342310 NMIQ13287 307 aaPredicted RBP14.98□□□□□ -0.01
LMX1A-202ENST00000342310 XAGE3Q8WTP9 111 aa14.98□□□□□ -0.01
LMX1A-202ENST00000342310 COL3A1P02461 1466 aaPredicted RBP14.98□□□□□ -0.01
LMX1A-202ENST00000342310 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
LMX1A-202ENST00000342310 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
LMX1A-202ENST00000342310 MYO3AQ8NEV4 1616 aa14.98□□□□□ -0.01
LMX1A-202ENST00000342310 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
LMX1A-202ENST00000342310 DDIT3P35638 169 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 WASHC4Q2M389 1173 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 SEC62Q99442 399 aaKnown RBP14.97□□□□□ -0.01
LMX1A-202ENST00000342310 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
LMX1A-202ENST00000342310 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 HAND2P61296 217 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
LMX1A-202ENST00000342310 TRIM5Q9C035 493 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 CCDC39Q9UFE4 941 aa14.97□□□□□ -0.01
LMX1A-202ENST00000342310 ATP6V1DQ9Y5K8 247 aa14.96□□□□□ -0.01
LMX1A-202ENST00000342310 GCP02774 474 aa14.96□□□□□ -0.01
LMX1A-202ENST00000342310 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
LMX1A-202ENST00000342310 MAP3K5Q99683 1374 aa14.96□□□□□ -0.01
LMX1A-202ENST00000342310 ARAP3Q8WWN8 1544 aa14.96□□□□□ -0.02
LMX1A-202ENST00000342310 SGSM2O43147 1006 aa14.96□□□□□ -0.02
LMX1A-202ENST00000342310 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.02
LMX1A-202ENST00000342310 RUFY3Q7L099 469 aa14.96□□□□□ -0.02
LMX1A-202ENST00000342310 ZBTB9Q96C00 473 aa14.96□□□□□ -0.02
LMX1A-202ENST00000342310 SUCLG2Q96I99 432 aa14.96□□□□□ -0.02
LMX1A-202ENST00000342310 BRD1O95696 1058 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 APPP05067 770 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
LMX1A-202ENST00000342310 A0A087WZG4 1122 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
LMX1A-202ENST00000342310 ATP10DQ9P241 1426 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
LMX1A-202ENST00000342310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
LMX1A-202ENST00000342310 NEO1Q92859 1461 aa14.95□□□□□ -0.02
LMX1A-202ENST00000342310 SF3A1Q15459 793 aaKnown RBP14.94□□□□□ -0.02
LMX1A-202ENST00000342310 ZC3H13Q5T200 1668 aaKnown RBP14.94□□□□□ -0.02
LMX1A-202ENST00000342310 ISM2Q6H9L7 571 aa14.94□□□□□ -0.02
LMX1A-202ENST00000342310 CBX1P83916 185 aa14.94□□□□□ -0.02
LMX1A-202ENST00000342310 TIMM10P62072 90 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 RNF20Q5VTR2 975 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 SPATA32Q96LK8 384 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 AATKQ6ZMQ8 1374 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 GOLIM4O00461 696 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 TPM2P07951 284 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 ATP2B1P20020 1258 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 FILIP1Q7Z7B0 1213 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 TAF6LQ9Y6J9 622 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 USP6P35125 1406 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 GRM8O00222 908 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 JAK2O60674 1132 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 BRF1Q92994 677 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 TNMDQ9H2S6 317 aa14.93□□□□□ -0.02
LMX1A-202ENST00000342310 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
LMX1A-202ENST00000342310 ME3Q16798 604 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 PPLO60437 1756 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
LMX1A-202ENST00000342310 BECN2A8MW95 431 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 F13A1P00488 732 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 ZNF445P59923 1031 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 CHAF1AQ13111 956 aaPredicted RBP14.92□□□□□ -0.02
LMX1A-202ENST00000342310 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
LMX1A-202ENST00000342310 BEND3Q5T5X7 828 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 SSH3Q8TE77 659 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 LMTK2Q8IWU2 1503 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 HSPA4P34932 840 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 CDC37L1Q7L3B6 337 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 DACT1Q9NYF0 836 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 ZKSCAN5Q9Y2L8 839 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 CPSF1Q10570 1443 aaKnown RBP14.92□□□□□ -0.02
LMX1A-202ENST00000342310 DIP2CQ9Y2E4 1556 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 KIAA0232Q92628 1395 aa14.92□□□□□ -0.02
LMX1A-202ENST00000342310 KRT85P78386 507 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 ZNF594Q96JF6 807 aaPredicted RBP14.91□□□□□ -0.02
LMX1A-202ENST00000342310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.91□□□□□ -0.02
LMX1A-202ENST00000342310 ATP7BP35670 1465 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 TTC21AQ8NDW8 1320 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 MED14O60244 1454 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 IGSF1Q8N6C5 1336 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 CABP4P57796 275 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 KSR2Q6VAB6 950 aa14.91□□□□□ -0.02
LMX1A-202ENST00000342310 ARHGEF28Q8N1W1 1705 aaKnown RBP14.9□□□□□ -0.02
LMX1A-202ENST00000342310 KIAA1210Q9ULL0 1709 aa14.9□□□□□ -0.02
LMX1A-202ENST00000342310 CDK12Q9NYV4 1490 aaPredicted RBP14.9□□□□□ -0.02
LMX1A-202ENST00000342310 TFCP2Q12800 502 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms