RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 ME1P48163 572 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
PCDHB13-201ENST00000341948 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 IQCA1Q86XH1 822 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 EVI5LQ96CN4 794 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 COL17A1Q9UMD9 1497 aaPredicted RBP17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 MCM4P33991 863 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
PCDHB13-201ENST00000341948 MBD5Q9P267 1494 aa17.71■□□□□ 0.42
PCDHB13-201ENST00000341948 GNPATO15228 680 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 BAG3O95817 575 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 PDIA4P13667 645 aaKnown RBP17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 ZNF76P36508 570 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 PDILTQ8N807 584 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 USP21Q9UK80 565 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 UQCRFS1P1P0C7P4 283 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 ATP2B3Q16720 1220 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 WASF1Q92558 559 aa17.7■□□□□ 0.42
PCDHB13-201ENST00000341948 ZHX3Q9H4I2 956 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 IQSEC3Q9UPP2 1182 aaPredicted RBP17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 OFD1O75665 1012 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 POLD1P28340 1107 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 TSHZ3Q63HK5 1081 aa17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 CCNL1Q9UK58 526 aaPredicted RBP17.69■□□□□ 0.42
PCDHB13-201ENST00000341948 VAMP4O75379 141 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 TNMDQ9H2S6 317 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 SMC2O95347 1197 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 IL13P35225 146 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 CWF19L2Q2TBE0 894 aaKnown RBP17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
PCDHB13-201ENST00000341948 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 MNS1Q8NEH6 495 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 SEC63Q9UGP8 760 aaKnown RBP17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 PAXIP1Q6ZW49 1069 aaPredicted RBP17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 PLEKHH1Q9ULM0 1364 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 PRIM1P49642 420 aaKnown RBP17.67■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 IRS4O14654 1257 aaPredicted RBP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 FILIP1LQ4L180 1135 aa17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 SSBP05455 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 IL15P40933 162 aaPredicted RBP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 CHD1O14646 1710 aa17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 IFIT3O14879 490 aaKnown RBP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 DDX21Q9NR30 783 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
PCDHB13-201ENST00000341948 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 MAGI2Q86UL8 1455 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 BMP2KLQ5H9B9 411 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 CCDC83Q8IWF9 413 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 TSPOAP1O95153 1857 aa17.65■□□□□ 0.42
PCDHB13-201ENST00000341948 ATP8B2P98198 1209 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 CT47A1Q5JQC4 288 aaPredicted RBP17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 ZC3H12CQ9C0D7 883 aaKnown RBP17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 MYO1BO43795 1136 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 FEZ1Q99689 392 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 SLC12A7Q9Y666 1083 aa17.64■□□□□ 0.41
PCDHB13-201ENST00000341948 F8W031 263 aaPredicted RBP17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 STK32BQ9NY57 414 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 HAND2P61296 217 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 PA2G4Q9UQ80 394 aaKnown RBP17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 SLC4A8Q2Y0W8 1093 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 IGHDP01880 384 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 OGFOD1Q8N543 542 aa17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 MAGEC2Q9UBF1 373 aaPredicted RBP17.63■□□□□ 0.41
PCDHB13-201ENST00000341948 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
PCDHB13-201ENST00000341948 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
PCDHB13-201ENST00000341948 GRPEL1Q9HAV7 217 aa17.62■□□□□ 0.41
PCDHB13-201ENST00000341948 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms