RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TRIM22Q8IYM9 498 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 TTF1Q15361 905 aaPredicted RBP15.28■□□□□ 0.04
LIN54-201ENST00000340417 IMMTQ16891 758 aaKnown RBP15.28■□□□□ 0.04
LIN54-201ENST00000340417 CCDC96Q2M329 555 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 ATP2B1P20020 1258 aa15.27■□□□□ 0.04
LIN54-201ENST00000340417 CEP89Q96ST8 783 aa15.27■□□□□ 0.04
LIN54-201ENST00000340417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.27■□□□□ 0.03
LIN54-201ENST00000340417 UQCRFS1P1P0C7P4 283 aa15.27■□□□□ 0.03
LIN54-201ENST00000340417 ZNF76P36508 570 aa15.27■□□□□ 0.03
LIN54-201ENST00000340417 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.03
LIN54-201ENST00000340417 CWC27Q6UX04 472 aaKnown RBP15.27■□□□□ 0.03
LIN54-201ENST00000340417 PDE6BP35913 854 aa15.26■□□□□ 0.03
LIN54-201ENST00000340417 LMBR1LQ6UX01 489 aa15.26■□□□□ 0.03
LIN54-201ENST00000340417 SUPT20HQ8NEM7 779 aa15.26■□□□□ 0.03
LIN54-201ENST00000340417 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
LIN54-201ENST00000340417 RARSP54136 660 aaKnown RBP15.26■□□□□ 0.03
LIN54-201ENST00000340417 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
LIN54-201ENST00000340417 GLRX3O76003 335 aaKnown RBP15.26■□□□□ 0.03
LIN54-201ENST00000340417 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 HOOK1Q9UJC3 728 aaKnown RBP15.25■□□□□ 0.03
LIN54-201ENST00000340417 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
LIN54-201ENST00000340417 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 GRM8O00222 908 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 CCDC24Q8N4L8 307 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
LIN54-201ENST00000340417 ALDH1B1P30837 517 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 EAPPQ56P03 285 aaPredicted RBP15.25■□□□□ 0.03
LIN54-201ENST00000340417 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
LIN54-201ENST00000340417 PIBF1Q8WXW3 757 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 LGR6Q9HBX8 967 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
LIN54-201ENST00000340417 UFL1O94874 794 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 ALDH1L1O75891 902 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 A1BGP04217 495 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 PRM3Q9NNZ6 103 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 RANBP6O60518 1105 aaKnown RBP15.24■□□□□ 0.03
LIN54-201ENST00000340417 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
LIN54-201ENST00000340417 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
LIN54-201ENST00000340417 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
LIN54-201ENST00000340417 IL13P35225 146 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 TNNI2P48788 182 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 NIM1KQ8IY84 436 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 POLR3AO14802 1390 aaPredicted RBP15.23■□□□□ 0.03
LIN54-201ENST00000340417 SH3TC1Q8TE82 1336 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 ARHGAP31Q2M1Z3 1444 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
LIN54-201ENST00000340417 PHKG2P15735 406 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 PDE4CQ08493 712 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 PICALMQ13492 652 aa15.23■□□□□ 0.03
LIN54-201ENST00000340417 CRNKL1Q9BZJ0 848 aaKnown RBP15.22■□□□□ 0.03
LIN54-201ENST00000340417 KIF1BO60333 1816 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 SPATA31A6Q5VVP1 1343 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
LIN54-201ENST00000340417 PDE4AP27815 886 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 CYP46A1Q9Y6A2 500 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
LIN54-201ENST00000340417 MX1P20591 662 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 ARHGEF25Q86VW2 580 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 GGA1Q9UJY5 639 aa15.22■□□□□ 0.03
LIN54-201ENST00000340417 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
LIN54-201ENST00000340417 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
LIN54-201ENST00000340417 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 GOLIM4O00461 696 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.03
LIN54-201ENST00000340417 SIK1P57059 783 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 C8orf58Q8NAV2 365 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 BICD2Q8TD16 824 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 LINS1Q8NG48 757 aa15.21■□□□□ 0.03
LIN54-201ENST00000340417 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
LIN54-201ENST00000340417 GJD4Q96KN9 370 aaPredicted RBP15.21■□□□□ 0.02
LIN54-201ENST00000340417 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
LIN54-201ENST00000340417 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
LIN54-201ENST00000340417 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
LIN54-201ENST00000340417 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
LIN54-201ENST00000340417 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
LIN54-201ENST00000340417 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
LIN54-201ENST00000340417 PCMTD1Q96MG8 357 aaPredicted RBP15.2■□□□□ 0.02
LIN54-201ENST00000340417 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
LIN54-201ENST00000340417 C22orf23Q9BZE7 217 aa15.19■□□□□ 0.02
LIN54-201ENST00000340417 STK3Q13188 491 aa15.19■□□□□ 0.02
LIN54-201ENST00000340417 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
LIN54-201ENST00000340417 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
LIN54-201ENST00000340417 CYP7A1P22680 504 aa15.19■□□□□ 0.02
LIN54-201ENST00000340417 PDE4BQ07343 736 aa15.19■□□□□ 0.02
LIN54-201ENST00000340417 DIP2BQ9P265 1576 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 RIMS1Q86UR5 1692 aaKnown RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 TNIP1Q15025 636 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms