RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 USP26Q9BXU7 913 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 NEURL1BA8MQ27 555 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 PDIA6Q15084 440 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 LMBR1LQ6UX01 489 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 CHAMP1Q96JM3 812 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 FSD1Q9BTV5 496 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 ST18O60284 1047 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 GSE1Q14687 1217 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 KCNQ4P56696 695 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 IL25Q9H293 177 aa12.38□□□□□ -0.43
RBFOX1-202ENST00000340209 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 GCKRQ14397 625 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 SSFA2P28290 1259 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 CHMLP26374 656 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 HSP90AB4PQ58FF6 505 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 KIF2CQ99661 725 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
RBFOX1-202ENST00000340209 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 STRCP1A6NGW2 1772 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 RABEP1Q15276 862 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
RBFOX1-202ENST00000340209 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 EXOC5O00471 708 aa12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 TFCP2Q12800 502 aa12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 CHGBP05060 677 aa12.35□□□□□ -0.43
RBFOX1-202ENST00000340209 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 PKP1Q13835 747 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 C8orf37Q96NL8 207 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 SLIT3O75094 1523 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 PIGBQ92521 554 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
RBFOX1-202ENST00000340209 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.43
RBFOX1-202ENST00000340209 FAM227BQ96M60 508 aa12.33□□□□□ -0.43
RBFOX1-202ENST00000340209 BRPF3Q9ULD4 1205 aa12.33□□□□□ -0.43
RBFOX1-202ENST00000340209 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.43
RBFOX1-202ENST00000340209 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 MCM4P33991 863 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 TIMM10P62072 90 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
RBFOX1-202ENST00000340209 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 SASH1O94885 1247 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 POLA2Q14181 598 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 UBAP1LF5GYI3 381 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 DBNDD2Q9BQY9 259 aa12.32□□□□□ -0.44
RBFOX1-202ENST00000340209 FOSBP53539 338 aa12.31□□□□□ -0.44
RBFOX1-202ENST00000340209 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
RBFOX1-202ENST00000340209 FGD1P98174 961 aa12.31□□□□□ -0.44
RBFOX1-202ENST00000340209 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
RBFOX1-202ENST00000340209 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
RBFOX1-202ENST00000340209 TRAK2O60296 914 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 CASTP20810 708 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 PUS3Q9BZE2 481 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 KIF1AQ12756 1690 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 STARD3NLO95772 234 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 NMIQ13287 307 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 DDB1Q16531 1140 aa12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-202ENST00000340209 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms