RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ALDH1L1O75891 902 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 GCKRQ14397 625 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 METTL22Q9BUU2 404 aaPredicted RBP9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 MRC1P22897 1456 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 CDC45O75419 566 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 MX1P20591 662 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 SLC4A9Q96Q91 983 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 SIL1Q9H173 461 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 ZBTB3Q9H5J0 574 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 TMOD3Q9NYL9 352 aa9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 A0A0G2JS52 829 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 UBE3BQ7Z3V4 1068 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 DNAJC10Q8IXB1 793 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 RILPL2Q969X0 211 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 IL25Q9H293 177 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
SRFBP1-201ENST00000339397 GLI3P10071 1580 aa9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 ARXQ96QS3 562 aa9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 SHANK3Q9BYB0 1731 aa9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
SRFBP1-201ENST00000339397 A0A087WZG4 1122 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 EXOC5O00471 708 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 SASH1O94885 1247 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 OS9Q13438 667 aaPredicted RBP9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 ACSBG1Q96GR2 724 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 GOLGB1Q14789 3259 aaKnown RBP9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 UTYO14607 1347 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 MTX1Q13505 466 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 USP26Q9BXU7 913 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 KCPQ6ZWJ8 1503 aa9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
SRFBP1-201ENST00000339397 PI4K2BQ8TCG2 481 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 KIF1BPQ96EK5 621 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 CCDC9Q9Y3X0 531 aaKnown RBP9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 COL16A1Q07092 1604 aaPredicted RBP9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 SYNE4Q8N205 404 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 PLBD2Q8NHP8 589 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 N4BP2Q86UW6 1770 aaPredicted RBP9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 CCDC8Q9H0W5 538 aaPredicted RBP9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 STAP2Q9UGK3 403 aa9.1□□□□□ -0.95
SRFBP1-201ENST00000339397 DISP2A7MBM2 1401 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 RAB11FIP3O75154 756 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 CASP7P55210 303 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 EAF2Q96CJ1 260 aaPredicted RBP9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 TOM1O60784 492 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 BECN1Q14457 450 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 MARCH10Q8NA82 808 aaPredicted RBP9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 ANTXR1Q9H6X2 564 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
SRFBP1-201ENST00000339397 SPATA31A1Q5TZJ5 1347 aa9.09□□□□□ -0.96
SRFBP1-201ENST00000339397 PLEKHG2Q9H7P9 1386 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 KCNQ2O43526 872 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 AHDC1Q5TGY3 1603 aaPredicted RBP9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 FRAT2O75474 233 aaPredicted RBP9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 CHMLP26374 656 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 KCNQ4P56696 695 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 HLFQ16534 295 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 C8orf37Q96NL8 207 aa9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 CCDC85AQ96PX6 553 aaPredicted RBP9.08□□□□□ -0.96
SRFBP1-201ENST00000339397 TNS2Q63HR2 1409 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 PTPN12Q05209 780 aaKnown RBP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 DDB1Q16531 1140 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 FAM182BQ5T319 152 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 ILDR2Q71H61 639 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 PTF1AQ7RTS3 328 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 AACSQ86V21 672 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 CHMP3Q9Y3E7 222 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 NDUFB9Q9Y6M9 179 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 FOXO4P98177 505 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 G3BP1Q13283 466 aaKnown RBP eCLIP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 BCL9O00512 1426 aa9.07□□□□□ -0.96
SRFBP1-201ENST00000339397 GPTP24298 496 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 H7C1W4 665 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 ERC2O15083 957 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 CYP19A1P11511 503 aaPredicted RBP9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 SMIM5Q71RC9 77 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 EDC3Q96F86 508 aaKnown RBP9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 FAM89AQ96GI7 184 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 PALD1Q9ULE6 856 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 PHLPP1O60346 1717 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms