RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PI4KAP1Q8N8J0 262 aa13.71□□□□□ -0.21
LRP1-202ENST00000338962 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
LRP1-202ENST00000338962 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
LRP1-202ENST00000338962 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
LRP1-202ENST00000338962 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 ANXA1P04083 346 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 SIK1P57059 783 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 CAMKK2Q96RR4 588 aa13.71□□□□□ -0.22
LRP1-202ENST00000338962 ITGB4P16144 1822 aa13.7□□□□□ -0.22
LRP1-202ENST00000338962 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
LRP1-202ENST00000338962 BAG6P46379 1132 aa13.7□□□□□ -0.22
LRP1-202ENST00000338962 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
LRP1-202ENST00000338962 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
LRP1-202ENST00000338962 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 C16orf71Q8IYS4 520 aaPredicted RBP13.69□□□□□ -0.22
LRP1-202ENST00000338962 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 CDC45O75419 566 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 GSPT1P15170 499 aaKnown RBP13.69□□□□□ -0.22
LRP1-202ENST00000338962 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
LRP1-202ENST00000338962 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 ADCY9O60503 1353 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
LRP1-202ENST00000338962 LRRCC1Q9C099 1032 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 LRRC4BQ9NT99 713 aa13.68□□□□□ -0.22
LRP1-202ENST00000338962 BTAF1O14981 1849 aa13.67□□□□□ -0.22
LRP1-202ENST00000338962 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
LRP1-202ENST00000338962 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
LRP1-202ENST00000338962 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
LRP1-202ENST00000338962 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
LRP1-202ENST00000338962 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 DDX21Q9NR30 783 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRP1-202ENST00000338962 MAP3K2Q9Y2U5 619 aa13.66□□□□□ -0.22
LRP1-202ENST00000338962 KAT6BQ8WYB5 2073 aa13.66□□□□□ -0.22
LRP1-202ENST00000338962 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 NBPF7P0C2Y1 421 aaPredicted RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 ITPK1Q13572 414 aa13.66□□□□□ -0.22
LRP1-202ENST00000338962 EZH2Q15910 746 aaKnown RBP13.66□□□□□ -0.22
LRP1-202ENST00000338962 KSR2Q6VAB6 950 aa13.66□□□□□ -0.22
LRP1-202ENST00000338962 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
LRP1-202ENST00000338962 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
LRP1-202ENST00000338962 TBC1D2Q9BYX2 928 aa13.65□□□□□ -0.22
LRP1-202ENST00000338962 USP16Q9Y5T5 823 aa13.65□□□□□ -0.22
LRP1-202ENST00000338962 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 CASC1Q6TDU7 716 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 PPP1R42Q7Z4L9 355 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 OSBPL3Q9H4L5 887 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 C9orf78Q9NZ63 289 aaPredicted RBP13.64□□□□□ -0.23
LRP1-202ENST00000338962 UBR2Q8IWV8 1755 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 SRGAP3O43295 1099 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 STARD3NLO95772 234 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
LRP1-202ENST00000338962 PDE1AP54750 535 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 KCNQ4P56696 695 aa13.64□□□□□ -0.23
LRP1-202ENST00000338962 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
LRP1-202ENST00000338962 SDSP20132 328 aa13.63□□□□□ -0.23
LRP1-202ENST00000338962 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
LRP1-202ENST00000338962 PDIA6Q15084 440 aa13.63□□□□□ -0.23
LRP1-202ENST00000338962 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
LRP1-202ENST00000338962 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
LRP1-202ENST00000338962 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
LRP1-202ENST00000338962 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 C5P01031 1676 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 LY75O60449 1722 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 RGPD3A6NKT7 1758 aaPredicted RBP13.62□□□□□ -0.23
LRP1-202ENST00000338962 RGPD4Q7Z3J3 1758 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 SURF6O75683 361 aaKnown RBP13.62□□□□□ -0.23
LRP1-202ENST00000338962 MYL6BP14649 208 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 MX1P20591 662 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 POLA2Q14181 598 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
LRP1-202ENST00000338962 RAB11FIP3O75154 756 aa13.61□□□□□ -0.23
LRP1-202ENST00000338962 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
LRP1-202ENST00000338962 RIC3Q7Z5B4 369 aa13.61□□□□□ -0.23
LRP1-202ENST00000338962 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
LRP1-202ENST00000338962 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
LRP1-202ENST00000338962 HSCBQ8IWL3 235 aa13.61□□□□□ -0.23
LRP1-202ENST00000338962 SLKQ9H2G2 1235 aaPredicted RBP13.61□□□□□ -0.23
LRP1-202ENST00000338962 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
LRP1-202ENST00000338962 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
LRP1-202ENST00000338962 CRKLP46109 303 aaKnown RBP13.6□□□□□ -0.23
LRP1-202ENST00000338962 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
LRP1-202ENST00000338962 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
LRP1-202ENST00000338962 GRM8O00222 908 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms