RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 GYS1P13807 737 aa15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 POLD1P28340 1107 aa15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 TTLL7Q6ZT98 887 aa15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 ANKRD13DQ6ZTN6 518 aa15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 LRP10Q7Z4F1 713 aa15.25■□□□□ 0.03
SPTLC1-202ENST00000337841 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
SPTLC1-202ENST00000337841 MAP3K15Q6ZN16 1313 aa15.24■□□□□ 0.03
SPTLC1-202ENST00000337841 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
SPTLC1-202ENST00000337841 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
SPTLC1-202ENST00000337841 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
SPTLC1-202ENST00000337841 FKBP8Q14318 412 aa15.23■□□□□ 0.03
SPTLC1-202ENST00000337841 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
SPTLC1-202ENST00000337841 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
SPTLC1-202ENST00000337841 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
SPTLC1-202ENST00000337841 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
SPTLC1-202ENST00000337841 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
SPTLC1-202ENST00000337841 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
SPTLC1-202ENST00000337841 BCL2L12Q9HB09 334 aa15.22■□□□□ 0.03
SPTLC1-202ENST00000337841 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
SPTLC1-202ENST00000337841 TM4SF1P30408 202 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 HLFQ16534 295 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 GIGYF2Q6Y7W6 1299 aaKnown RBP15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 MRPL50Q8N5N7 158 aaKnown RBP15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 SETDB2Q96T68 719 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 PARP3Q9Y6F1 533 aa15.21■□□□□ 0.03
SPTLC1-202ENST00000337841 MMP10P09238 476 aa15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 RARSP54136 660 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 FLIIQ13045 1269 aa15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 G2E3Q7L622 706 aa15.2■□□□□ 0.02
SPTLC1-202ENST00000337841 TCIRG1Q13488 830 aa15.19■□□□□ 0.02
SPTLC1-202ENST00000337841 NFIXQ14938 502 aa15.19■□□□□ 0.02
SPTLC1-202ENST00000337841 TBC1D9BQ66K14 1250 aa15.19■□□□□ 0.02
SPTLC1-202ENST00000337841 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-202ENST00000337841 NIP7Q9Y221 180 aaKnown RBP eCLIP15.19■□□□□ 0.02
SPTLC1-202ENST00000337841 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
SPTLC1-202ENST00000337841 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
SPTLC1-202ENST00000337841 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
SPTLC1-202ENST00000337841 LAMB4A4D0S4 1761 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 NPHP1O15259 732 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 SERPINB2P05120 415 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 PTGER2P43116 358 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 NEXNQ0ZGT2 675 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
SPTLC1-202ENST00000337841 PARP10Q53GL7 1025 aa15.16■□□□□ 0.02
SPTLC1-202ENST00000337841 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
SPTLC1-202ENST00000337841 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
SPTLC1-202ENST00000337841 METTL22Q9BUU2 404 aaPredicted RBP15.16■□□□□ 0.02
SPTLC1-202ENST00000337841 PTPRCP08575 1304 aa15.16■□□□□ 0.02
SPTLC1-202ENST00000337841 QSER1Q2KHR3 1735 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 GPTP24298 496 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 DDR1Q08345 913 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 NBPF5PQ86XG9 351 aaPredicted RBP15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 MYD88Q99836 296 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
SPTLC1-202ENST00000337841 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 BCAR3O75815 825 aa15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 API5Q9BZZ5 524 aaKnown RBP15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
SPTLC1-202ENST00000337841 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
SPTLC1-202ENST00000337841 FAM177BA6PVY3 158 aa15.13■□□□□ 0.01
SPTLC1-202ENST00000337841 FRAT1Q92837 279 aaPredicted RBP15.13■□□□□ 0.01
SPTLC1-202ENST00000337841 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
SPTLC1-202ENST00000337841 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
SPTLC1-202ENST00000337841 CASZ1Q86V15 1759 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 F6X3S4 739 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 SUSD4Q5VX71 490 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 CNBD1Q8NA66 436 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 CCDC191Q8NCU4 936 aa15.12■□□□□ 0.01
SPTLC1-202ENST00000337841 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 TUBGCP6Q96RT7 1819 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 ST5P78524 1137 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 LINS1Q8NG48 757 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 ADCY9O60503 1353 aa15.11■□□□□ 0.01
SPTLC1-202ENST00000337841 ZKSCAN2Q63HK3 967 aa15.1■□□□□ 0.01
SPTLC1-202ENST00000337841 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
SPTLC1-202ENST00000337841 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 HSP90B1P14625 803 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms