RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 FAM196AQ6ZSG2 479 aa29.25■■■□□ 2.27
TSEN54-201ENST00000333213 METTL22Q9BUU2 404 aaPredicted RBP29.25■■■□□ 2.27
TSEN54-201ENST00000333213 ZNF831Q5JPB2 1677 aa29.25■■■□□ 2.27
TSEN54-201ENST00000333213 SKAP1Q86WV1 359 aa29.24■■■□□ 2.27
TSEN54-201ENST00000333213 LINS1Q8NG48 757 aa29.24■■■□□ 2.27
TSEN54-201ENST00000333213 BCL11BQ9C0K0 894 aaPredicted RBP29.24■■■□□ 2.27
TSEN54-201ENST00000333213 RWDD1Q9H446 243 aaPredicted RBP29.24■■■□□ 2.27
TSEN54-201ENST00000333213 NBPF7P0C2Y1 421 aaPredicted RBP29.23■■■□□ 2.27
TSEN54-201ENST00000333213 ZNF330Q9Y3S2 320 aaPredicted RBP29.23■■■□□ 2.27
TSEN54-201ENST00000333213 CRKLP46109 303 aaKnown RBP29.22■■■□□ 2.27
TSEN54-201ENST00000333213 NUP188Q5SRE5 1749 aa29.22■■■□□ 2.27
TSEN54-201ENST00000333213 COL5A3P25940 1745 aaPredicted RBP29.22■■■□□ 2.27
TSEN54-201ENST00000333213 ALDH1L1O75891 902 aa29.22■■■□□ 2.27
TSEN54-201ENST00000333213 MYD88Q99836 296 aa29.22■■■□□ 2.27
TSEN54-201ENST00000333213 MYH14Q7Z406 1995 aaKnown RBP29.21■■■□□ 2.27
TSEN54-201ENST00000333213 ZBTB3Q9H5J0 574 aa29.21■■■□□ 2.27
TSEN54-201ENST00000333213 GNAI3P08754 354 aa29.2■■■□□ 2.27
TSEN54-201ENST00000333213 CEP85Q6P2H3 762 aa29.2■■■□□ 2.27
TSEN54-201ENST00000333213 LINC00116Q8NCU8 138 aa29.2■■■□□ 2.27
TSEN54-201ENST00000333213 RREB1Q92766 1687 aa29.2■■■□□ 2.27
TSEN54-201ENST00000333213 CCDC87Q9NVE4 849 aa29.2■■■□□ 2.26
TSEN54-201ENST00000333213 NEURL1BA8MQ27 555 aa29.19■■■□□ 2.26
TSEN54-201ENST00000333213 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
TSEN54-201ENST00000333213 GNAI2P04899 355 aa29.18■■■□□ 2.26
TSEN54-201ENST00000333213 LY75O60449 1722 aa29.18■■■□□ 2.26
TSEN54-201ENST00000333213 TRIM37O94972 964 aa29.18■■■□□ 2.26
TSEN54-201ENST00000333213 ANKRD44Q8N8A2 993 aa29.18■■■□□ 2.26
TSEN54-201ENST00000333213 ATP5J2-PTCD1G3V325 749 aa29.17■■■□□ 2.26
TSEN54-201ENST00000333213 EIF5P55010 431 aaKnown RBP29.17■■■□□ 2.26
TSEN54-201ENST00000333213 NEXNQ0ZGT2 675 aa29.17■■■□□ 2.26
TSEN54-201ENST00000333213 LRRFIP2Q9Y608 721 aaKnown RBP29.17■■■□□ 2.26
TSEN54-201ENST00000333213 UBTFL1P0CB47 393 aaPredicted RBP29.16■■■□□ 2.26
TSEN54-201ENST00000333213 RPAP2Q8IXW5 612 aaPredicted RBP29.16■■■□□ 2.26
TSEN54-201ENST00000333213 GCKRQ14397 625 aa29.15■■■□□ 2.26
TSEN54-201ENST00000333213 MSH5O43196 834 aa29.14■■■□□ 2.26
TSEN54-201ENST00000333213 IBTKQ9P2D0 1353 aaPredicted RBP29.14■■■□□ 2.26
TSEN54-201ENST00000333213 UTYO14607 1347 aa29.14■■■□□ 2.26
TSEN54-201ENST00000333213 SMC5Q8IY18 1101 aa29.14■■■□□ 2.25
TSEN54-201ENST00000333213 CCNL1Q9UK58 526 aaPredicted RBP29.14■■■□□ 2.25
TSEN54-201ENST00000333213 MAP3K15Q6ZN16 1313 aa29.13■■■□□ 2.25
TSEN54-201ENST00000333213 GRM8O00222 908 aa29.13■■■□□ 2.25
TSEN54-201ENST00000333213 C9orf78Q9NZ63 289 aaPredicted RBP29.13■■■□□ 2.25
TSEN54-201ENST00000333213 HLFQ16534 295 aa29.12■■■□□ 2.25
TSEN54-201ENST00000333213 KIF6Q6ZMV9 814 aa29.12■■■□□ 2.25
TSEN54-201ENST00000333213 ARXQ96QS3 562 aa29.12■■■□□ 2.25
TSEN54-201ENST00000333213 TBC1D2BQ9UPU7 963 aa29.12■■■□□ 2.25
TSEN54-201ENST00000333213 LRRC4BQ9NT99 713 aa29.1■■■□□ 2.25
TSEN54-201ENST00000333213 AFDNP55196 1824 aaKnown RBP29.1■■■□□ 2.25
TSEN54-201ENST00000333213 PNMA6EA0A0J9YXQ4 647 aa29.1■■■□□ 2.25
TSEN54-201ENST00000333213 DZIP3Q86Y13 1208 aaKnown RBP29.1■■■□□ 2.25
TSEN54-201ENST00000333213 KAZALD1Q96I82 304 aa29.1■■■□□ 2.25
TSEN54-201ENST00000333213 CNTNAP4Q9C0A0 1308 aa29.09■■■□□ 2.25
TSEN54-201ENST00000333213 TCIRG1Q13488 830 aa29.09■■■□□ 2.25
TSEN54-201ENST00000333213 GIGYF2Q6Y7W6 1299 aaKnown RBP29.08■■■□□ 2.25
TSEN54-201ENST00000333213 ISCA1Q9BUE6 129 aa29.08■■■□□ 2.25
TSEN54-201ENST00000333213 PDZRN3Q9UPQ7 1066 aa29.08■■■□□ 2.25
TSEN54-201ENST00000333213 TAF1LQ8IZX4 1826 aa29.08■■■□□ 2.25
TSEN54-201ENST00000333213 ATP8B2P98198 1209 aa29.08■■■□□ 2.25
TSEN54-201ENST00000333213 JARID2Q92833 1246 aaPredicted RBP29.08■■■□□ 2.25
TSEN54-201ENST00000333213 SMIM5Q71RC9 77 aa29.06■■■□□ 2.24
TSEN54-201ENST00000333213 SUCLG2Q96I99 432 aa29.06■■■□□ 2.24
TSEN54-201ENST00000333213 DCTPP1Q9H773 170 aa29.06■■■□□ 2.24
TSEN54-201ENST00000333213 ERVV-1B6SEH8 477 aa29.05■■■□□ 2.24
TSEN54-201ENST00000333213 COL15A1P39059 1388 aa29.05■■■□□ 2.24
TSEN54-201ENST00000333213 CASP7P55210 303 aa29.05■■■□□ 2.24
TSEN54-201ENST00000333213 RC3H1Q5TC82 1133 aaKnown RBP29.05■■■□□ 2.24
TSEN54-201ENST00000333213 A0A087WZG4 1122 aa29.04■■■□□ 2.24
TSEN54-201ENST00000333213 AMIGO3Q86WK7 504 aa29.04■■■□□ 2.24
TSEN54-201ENST00000333213 GCC1Q96CN9 775 aa29.04■■■□□ 2.24
TSEN54-201ENST00000333213 NPM2Q86SE8 214 aaKnown RBP29.04■■■□□ 2.24
TSEN54-201ENST00000333213 CCDC191Q8NCU4 936 aa29.04■■■□□ 2.24
TSEN54-201ENST00000333213 CWC25Q9NXE8 425 aaPredicted RBP29.04■■■□□ 2.24
TSEN54-201ENST00000333213 TRIM28Q13263 835 aaKnown RBP29.03■■■□□ 2.24
TSEN54-201ENST00000333213 PROM2Q8N271 834 aa29.03■■■□□ 2.24
TSEN54-201ENST00000333213 NUP98P52948 1817 aa29.03■■■□□ 2.24
TSEN54-201ENST00000333213 CAMTA2O94983 1202 aa29.02■■■□□ 2.24
TSEN54-201ENST00000333213 UBE3BQ7Z3V4 1068 aa29.02■■■□□ 2.24
TSEN54-201ENST00000333213 PPP1R42Q7Z4L9 355 aa29.02■■■□□ 2.24
TSEN54-201ENST00000333213 H7C1W4 665 aa29.02■■■□□ 2.24
TSEN54-201ENST00000333213 EPHA10Q5JZY3 1008 aa29.02■■■□□ 2.24
TSEN54-201ENST00000333213 C4BP0C0L5 1744 aa29.01■■■□□ 2.23
TSEN54-201ENST00000333213 SSH3Q8TE77 659 aa29.01■■■□□ 2.23
TSEN54-201ENST00000333213 RPS6KA4O75676 772 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 NUCB1Q02818 461 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 MTX1Q13505 466 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 BICC1Q9H694 974 aaKnown RBP29■■■□□ 2.23
TSEN54-201ENST00000333213 HMMRO75330 724 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 GPTP24298 496 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 POLA2Q14181 598 aa29■■■□□ 2.23
TSEN54-201ENST00000333213 GNPATO15228 680 aa28.99■■■□□ 2.23
TSEN54-201ENST00000333213 RGS3P49796 1198 aa28.99■■■□□ 2.23
TSEN54-201ENST00000333213 RTL5Q5HYW3 569 aaPredicted RBP28.99■■■□□ 2.23
TSEN54-201ENST00000333213 SRGAP3O43295 1099 aa28.98■■■□□ 2.23
TSEN54-201ENST00000333213 ANKRD36CQ5JPF3 1778 aa28.98■■■□□ 2.23
TSEN54-201ENST00000333213 NLRP10Q86W26 655 aa28.98■■■□□ 2.23
TSEN54-201ENST00000333213 PDE4AP27815 886 aa28.97■■■□□ 2.23
TSEN54-201ENST00000333213 HSP90AB3PQ58FF7 597 aa28.97■■■□□ 2.23
TSEN54-201ENST00000333213 SLC27A3Q5K4L6 730 aa28.97■■■□□ 2.23
TSEN54-201ENST00000333213 ZNF34Q8IZ26 560 aa28.97■■■□□ 2.23
TSEN54-201ENST00000333213 UBN2Q6ZU65 1347 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms