RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 DNAI1Q9UI46 699 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 CHMLP26374 656 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 AK2P54819 239 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 MYO6Q9UM54 1294 aa18.49■□□□□ 0.55
SLIT3-201ENST00000332966 DUOX2Q9NRD8 1548 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 IVLP07476 585 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 CCDC69A6NI79 296 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 STIM1Q13586 685 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 DNAAF4Q8WXU2 420 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 KDM5CP41229 1560 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
SLIT3-201ENST00000332966 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
SLIT3-201ENST00000332966 LUZP1Q86V48 1076 aa18.47■□□□□ 0.55
SLIT3-201ENST00000332966 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
SLIT3-201ENST00000332966 GUCY1B3Q02153 619 aa18.47■□□□□ 0.55
SLIT3-201ENST00000332966 IMMTQ16891 758 aaKnown RBP18.47■□□□□ 0.55
SLIT3-201ENST00000332966 WASF1Q92558 559 aa18.47■□□□□ 0.55
SLIT3-201ENST00000332966 BIN1O00499 593 aa18.46■□□□□ 0.55
SLIT3-201ENST00000332966 BRD1O95696 1058 aa18.46■□□□□ 0.55
SLIT3-201ENST00000332966 LUC7LQ9NQ29 371 aaKnown RBP18.46■□□□□ 0.55
SLIT3-201ENST00000332966 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
SLIT3-201ENST00000332966 NEK1Q96PY6 1258 aa18.46■□□□□ 0.55
SLIT3-201ENST00000332966 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
SLIT3-201ENST00000332966 CCDC8Q9H0W5 538 aaPredicted RBP18.45■□□□□ 0.54
SLIT3-201ENST00000332966 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
SLIT3-201ENST00000332966 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
SLIT3-201ENST00000332966 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
SLIT3-201ENST00000332966 USP19O94966 1318 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 VPS53Q5VIR6 699 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 KIAA1328Q86T90 577 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 CEP131Q9UPN4 1083 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 DMTNQ08495 405 aa18.44■□□□□ 0.54
SLIT3-201ENST00000332966 AOPEPQ8N6M6 819 aa18.43■□□□□ 0.54
SLIT3-201ENST00000332966 GIMAP7Q8NHV1 300 aa18.43■□□□□ 0.54
SLIT3-201ENST00000332966 CCDC12Q8WUD4 166 aaPredicted RBP18.43■□□□□ 0.54
SLIT3-201ENST00000332966 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
SLIT3-201ENST00000332966 CNNM3Q8NE01 707 aa18.43■□□□□ 0.54
SLIT3-201ENST00000332966 PIK3R4Q99570 1358 aa18.43■□□□□ 0.54
SLIT3-201ENST00000332966 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
SLIT3-201ENST00000332966 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
SLIT3-201ENST00000332966 UBASH3AP57075 661 aa18.42■□□□□ 0.54
SLIT3-201ENST00000332966 GPT2Q8TD30 523 aa18.42■□□□□ 0.54
SLIT3-201ENST00000332966 GADD45BO75293 160 aaPredicted RBP18.42■□□□□ 0.54
SLIT3-201ENST00000332966 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
SLIT3-201ENST00000332966 MRPS27Q92552 414 aaKnown RBP18.42■□□□□ 0.54
SLIT3-201ENST00000332966 CCT2P78371 535 aaKnown RBP18.42■□□□□ 0.54
SLIT3-201ENST00000332966 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
SLIT3-201ENST00000332966 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
SLIT3-201ENST00000332966 EPS15P42566 896 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 GTF2A1P52655 376 aaPredicted RBP18.41■□□□□ 0.54
SLIT3-201ENST00000332966 CTR9Q6PD62 1173 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 TSC1Q92574 1164 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 GTF2E1P29083 439 aaPredicted RBP18.41■□□□□ 0.54
SLIT3-201ENST00000332966 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 TTC21BQ7Z4L5 1316 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 TMX1Q9H3N1 280 aa18.41■□□□□ 0.54
SLIT3-201ENST00000332966 ATP10BO94823 1461 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 ERLIN2O94905 339 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 SYT10Q6XYQ8 523 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 STK11IPQ8N1F8 1099 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 KCNG4Q8TDN1 519 aa18.4■□□□□ 0.54
SLIT3-201ENST00000332966 GOLGA6L7A0A1B0GV03 622 aa18.39■□□□□ 0.54
SLIT3-201ENST00000332966 ZNF75DP51815 510 aa18.39■□□□□ 0.54
SLIT3-201ENST00000332966 NACAP1Q9BZK3 213 aa18.39■□□□□ 0.54
SLIT3-201ENST00000332966 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
SLIT3-201ENST00000332966 LARP1Q6PKG0 1096 aaKnown RBP18.39■□□□□ 0.53
SLIT3-201ENST00000332966 CENPHQ9H3R5 247 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 MICALCLQ6ZW33 695 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 VPS37DQ86XT2 251 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 TUBB4BP68371 445 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 RASSF4Q9H2L5 321 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 ZSWIM4Q9H7M6 989 aa18.39■□□□□ 0.53
SLIT3-201ENST00000332966 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
SLIT3-201ENST00000332966 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 BRF1Q92994 677 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 POLKQ9UBT6 870 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 MYL6BP14649 208 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 KLHL10Q6JEL2 608 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 GTF3C6Q969F1 213 aa18.38■□□□□ 0.53
SLIT3-201ENST00000332966 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
SLIT3-201ENST00000332966 MCM6Q14566 821 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 ODF2Q5BJF6 829 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 CPLX3Q8WVH0 158 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 TCEANC2Q96MN5 208 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 CAPN2P17655 700 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 PKP1Q13835 747 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 ZFYVE9O95405 1425 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms