RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 RAB11FIP3O75154 756 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 RASEFQ8IZ41 740 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 LINS1Q8NG48 757 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 EAF2Q96CJ1 260 aaPredicted RBP22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 SASH1O94885 1247 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 A1BGP04217 495 aa22.1■■□□□ 1.13
LYSMD4-201ENST00000332728 SPATA31A3Q5VYP0 1347 aa22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 G3BP1Q13283 466 aaKnown RBP eCLIP22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 ANKRD13DQ6ZTN6 518 aa22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 COL9A3Q14050 684 aaPredicted RBP22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 GAS2L3Q86XJ1 694 aa22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 ZBTB3Q9H5J0 574 aa22.09■■□□□ 1.13
LYSMD4-201ENST00000332728 NEURL1BA8MQ27 555 aa22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 TRPM3Q9HCF6 1732 aaPredicted RBP22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 MCCP23508 829 aa22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 PTH1RQ03431 593 aa22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
LYSMD4-201ENST00000332728 KDM3BQ7LBC6 1761 aa22.08■■□□□ 1.12
LYSMD4-201ENST00000332728 USP54Q70EL1 1684 aa22.08■■□□□ 1.12
LYSMD4-201ENST00000332728 LARP1Q6PKG0 1096 aaKnown RBP22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 TTLL7Q6ZT98 887 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 CNTROBQ8N137 903 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 FAM227BQ96M60 508 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 DIAPH3Q9NSV4 1193 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 TCEANC2Q96MN5 208 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 ZDHHC9Q9Y397 364 aa22.07■■□□□ 1.12
LYSMD4-201ENST00000332728 PRPF40AO75400 957 aaKnown RBP22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 SNRPA1P09661 255 aaKnown RBP22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 EVA1CP58658 441 aa22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 GDPD2Q9HCC8 539 aa22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 CIZ1Q9ULV3 898 aaPredicted RBP22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 ALDH1L1O75891 902 aa22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 GCKRQ14397 625 aa22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 RBM27Q9P2N5 1060 aaKnown RBP22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 LMO7Q8WWI1 1683 aa22.06■■□□□ 1.12
LYSMD4-201ENST00000332728 A0A087WZG4 1122 aa22.05■■□□□ 1.12
LYSMD4-201ENST00000332728 DCAF5Q96JK2 942 aa22.05■■□□□ 1.12
LYSMD4-201ENST00000332728 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
LYSMD4-201ENST00000332728 FMNL2Q96PY5 1086 aa22.05■■□□□ 1.12
LYSMD4-201ENST00000332728 PXDNLA1KZ92 1463 aa22.05■■□□□ 1.12
LYSMD4-201ENST00000332728 CACNA1FO60840 1977 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 SLFNL1Q499Z3 407 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 PRPF40BQ6NWY9 871 aaKnown RBP22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 KIAA1211Q6ZU35 1233 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 HEG1Q9ULI3 1381 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 ECHDC1Q9NTX5 307 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
LYSMD4-201ENST00000332728 SGSM2O43147 1006 aa22.03■■□□□ 1.12
LYSMD4-201ENST00000332728 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
LYSMD4-201ENST00000332728 KCNJ4P48050 445 aa22.03■■□□□ 1.12
LYSMD4-201ENST00000332728 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
LYSMD4-201ENST00000332728 NBPF26B4DH59 902 aa22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 NBPF14Q5TI25 921 aa22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 NBPF10Q6P3W6 841 aaKnown RBP22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 NBPF15Q8N660 670 aa22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 ZCRB1Q8TBF4 217 aaKnown RBP22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 ADCK5Q3MIX3 580 aa22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
LYSMD4-201ENST00000332728 SNX14Q9Y5W7 946 aa22.02■■□□□ 1.11
LYSMD4-201ENST00000332728 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 CASTP20810 708 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 TFCP2Q12800 502 aa22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 HSP90AB4PQ58FF6 505 aa22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 NSFL1CQ9UNZ2 370 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-201ENST00000332728 NCAPD2Q15021 1401 aa22■■□□□ 1.11
LYSMD4-201ENST00000332728 LSG1Q9H089 658 aaKnown RBP22■■□□□ 1.11
LYSMD4-201ENST00000332728 TAF6LQ9Y6J9 622 aa22■■□□□ 1.11
LYSMD4-201ENST00000332728 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
LYSMD4-201ENST00000332728 FSD1Q9BTV5 496 aa22■■□□□ 1.11
LYSMD4-201ENST00000332728 GOLGA6L22H0YM25 854 aa21.99■■□□□ 1.11
LYSMD4-201ENST00000332728 NMIQ13287 307 aaPredicted RBP21.99■■□□□ 1.11
LYSMD4-201ENST00000332728 LMBR1LQ6UX01 489 aa21.99■■□□□ 1.11
LYSMD4-201ENST00000332728 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
LYSMD4-201ENST00000332728 LARGE1O95461 756 aa21.98■■□□□ 1.11
LYSMD4-201ENST00000332728 HSPA4P34932 840 aa21.98■■□□□ 1.11
LYSMD4-201ENST00000332728 NEUROD6Q96NK8 337 aa21.98■■□□□ 1.11
LYSMD4-201ENST00000332728 JAKMIP1Q96N16 626 aaKnown RBP21.98■■□□□ 1.11
LYSMD4-201ENST00000332728 A0A0D9SFI3 127 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 AK2P54819 239 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 CCDC129Q6ZRS4 1044 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 LRP10Q7Z4F1 713 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 ALS2Q96Q42 1657 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 C5P01031 1676 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 NUCB2P80303 420 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 MTX1Q13505 466 aa21.97■■□□□ 1.11
LYSMD4-201ENST00000332728 L1TD1Q5T7N2 865 aaKnown RBP21.96■■□□□ 1.11
LYSMD4-201ENST00000332728 GPATCH3Q96I76 525 aa21.96■■□□□ 1.11
LYSMD4-201ENST00000332728 SEC62Q99442 399 aaKnown RBP21.96■■□□□ 1.11
LYSMD4-201ENST00000332728 GRPEL1Q9HAV7 217 aa21.96■■□□□ 1.11
LYSMD4-201ENST00000332728 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
LYSMD4-201ENST00000332728 RAD50Q92878 1312 aa21.95■■□□□ 1.1
LYSMD4-201ENST00000332728 NECAB1Q8N987 351 aa21.95■■□□□ 1.1
LYSMD4-201ENST00000332728 DBNDD2Q9BQY9 259 aa21.95■■□□□ 1.1
LYSMD4-201ENST00000332728 DDX46Q7L014 1031 aaKnown RBP21.95■■□□□ 1.1
LYSMD4-201ENST00000332728 SYNE4Q8N205 404 aa21.95■■□□□ 1.1
LYSMD4-201ENST00000332728 FSD2A1L4K1 749 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms