RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 TOMM70O94826 608 aa11.81□□□□□ -0.52
BEST3-203ENST00000331471 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
BEST3-203ENST00000331471 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
BEST3-203ENST00000331471 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
BEST3-203ENST00000331471 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
BEST3-203ENST00000331471 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
BEST3-203ENST00000331471 AFDNP55196 1824 aaKnown RBP11.8□□□□□ -0.52
BEST3-203ENST00000331471 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
BEST3-203ENST00000331471 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
BEST3-203ENST00000331471 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
BEST3-203ENST00000331471 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
BEST3-203ENST00000331471 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
BEST3-203ENST00000331471 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
BEST3-203ENST00000331471 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
BEST3-203ENST00000331471 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
BEST3-203ENST00000331471 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
BEST3-203ENST00000331471 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
BEST3-203ENST00000331471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
BEST3-203ENST00000331471 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
BEST3-203ENST00000331471 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
BEST3-203ENST00000331471 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
BEST3-203ENST00000331471 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
BEST3-203ENST00000331471 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
BEST3-203ENST00000331471 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 H0YIN7 160 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 APLP1P51693 650 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 DLEC1Q9Y238 1755 aa11.78□□□□□ -0.52
BEST3-203ENST00000331471 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.52
BEST3-203ENST00000331471 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.52
BEST3-203ENST00000331471 RASSF7Q02833 373 aa11.77□□□□□ -0.52
BEST3-203ENST00000331471 TTLL6Q8N841 843 aa11.77□□□□□ -0.52
BEST3-203ENST00000331471 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.52
BEST3-203ENST00000331471 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.52
BEST3-203ENST00000331471 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.52
BEST3-203ENST00000331471 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
BEST3-203ENST00000331471 NPHP1O15259 732 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
BEST3-203ENST00000331471 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 A1BGP04217 495 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
BEST3-203ENST00000331471 ZNF622Q969S3 477 aaKnown RBP eCLIP11.76□□□□□ -0.53
BEST3-203ENST00000331471 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
BEST3-203ENST00000331471 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
BEST3-203ENST00000331471 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
BEST3-203ENST00000331471 KCNQ3O43525 872 aa11.75□□□□□ -0.53
BEST3-203ENST00000331471 LMNB1P20700 586 aa11.75□□□□□ -0.53
BEST3-203ENST00000331471 PDE6BP35913 854 aa11.75□□□□□ -0.53
BEST3-203ENST00000331471 SBF1O95248 1867 aa11.75□□□□□ -0.53
BEST3-203ENST00000331471 ST5P78524 1137 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 MCM10Q7L590 875 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 CCDC24Q8N4L8 307 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 BRIP1Q9BX63 1249 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
BEST3-203ENST00000331471 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
BEST3-203ENST00000331471 FSTL1Q12841 308 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
BEST3-203ENST00000331471 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 TIAM2Q8IVF5 1701 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 ANKRD31Q8N7Z5 1873 aa11.73□□□□□ -0.53
BEST3-203ENST00000331471 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
BEST3-203ENST00000331471 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
BEST3-203ENST00000331471 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
BEST3-203ENST00000331471 NEFMP07197 916 aa11.72□□□□□ -0.53
BEST3-203ENST00000331471 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
BEST3-203ENST00000331471 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
BEST3-203ENST00000331471 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 C21orf2O43822 256 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
BEST3-203ENST00000331471 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
BEST3-203ENST00000331471 GLTPD2A6NH11 291 aa11.7□□□□□ -0.54
BEST3-203ENST00000331471 NFKBIEO00221 500 aa11.7□□□□□ -0.54
BEST3-203ENST00000331471 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
BEST3-203ENST00000331471 PRELPP51888 382 aa11.7□□□□□ -0.54
BEST3-203ENST00000331471 SMC1BQ8NDV3 1235 aa11.7□□□□□ -0.54
BEST3-203ENST00000331471 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
BEST3-203ENST00000331471 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
BEST3-203ENST00000331471 CACNA1SQ13698 1873 aa11.69□□□□□ -0.54
BEST3-203ENST00000331471 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
BEST3-203ENST00000331471 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
BEST3-203ENST00000331471 HTRA3P83110 453 aa11.69□□□□□ -0.54
BEST3-203ENST00000331471 STYK1Q6J9G0 422 aa11.69□□□□□ -0.54
BEST3-203ENST00000331471 DNAJC5GQ8N7S2 189 aa11.69□□□□□ -0.54
BEST3-203ENST00000331471 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
BEST3-203ENST00000331471 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
BEST3-203ENST00000331471 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
BEST3-203ENST00000331471 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms