RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 VGFO15240 615 aaPredicted RBP24.26■■□□□ 1.47
CMTM4-201ENST00000330687 UBXN4Q92575 508 aa24.26■■□□□ 1.47
CMTM4-201ENST00000330687 CCDC171Q6TFL3 1326 aa24.26■■□□□ 1.47
CMTM4-201ENST00000330687 CCDC191Q8NCU4 936 aa24.25■■□□□ 1.47
CMTM4-201ENST00000330687 ST5P78524 1137 aa24.25■■□□□ 1.47
CMTM4-201ENST00000330687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
CMTM4-201ENST00000330687 C11orf57Q6ZUT1 292 aaPredicted RBP24.25■■□□□ 1.47
CMTM4-201ENST00000330687 RAB11FIP3O75154 756 aa24.24■■□□□ 1.47
CMTM4-201ENST00000330687 ZRSR1Q15695 479 aaKnown RBP24.24■■□□□ 1.47
CMTM4-201ENST00000330687 PLA2G4DQ86XP0 818 aa24.24■■□□□ 1.47
CMTM4-201ENST00000330687 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
CMTM4-201ENST00000330687 MAP3K4Q9Y6R4 1608 aa24.24■■□□□ 1.47
CMTM4-201ENST00000330687 H3BQV1 296 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 URI1O94763 535 aaPredicted RBP24.23■■□□□ 1.47
CMTM4-201ENST00000330687 HAP1P54257 671 aaPredicted RBP24.23■■□□□ 1.47
CMTM4-201ENST00000330687 IFFO2Q5TF58 517 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 DNAI1Q9UI46 699 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 CYP2C19P33261 490 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 LRRC7Q96NW7 1537 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 PNMA6AP0CW24 399 aaPredicted RBP24.23■■□□□ 1.47
CMTM4-201ENST00000330687 PTH1RQ03431 593 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 LARP1Q6PKG0 1096 aaKnown RBP24.23■■□□□ 1.47
CMTM4-201ENST00000330687 HYPKQ9NX55 129 aa24.23■■□□□ 1.47
CMTM4-201ENST00000330687 ARHGEF40Q8TER5 1519 aa24.22■■□□□ 1.47
CMTM4-201ENST00000330687 SGSM2O43147 1006 aa24.22■■□□□ 1.47
CMTM4-201ENST00000330687 LMAN1P49257 510 aa24.22■■□□□ 1.47
CMTM4-201ENST00000330687 CNTROBQ8N137 903 aa24.22■■□□□ 1.47
CMTM4-201ENST00000330687 RIMS2Q9UQ26 1411 aa24.22■■□□□ 1.47
CMTM4-201ENST00000330687 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
CMTM4-201ENST00000330687 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
CMTM4-201ENST00000330687 TTC14Q96N46 770 aa24.21■■□□□ 1.47
CMTM4-201ENST00000330687 FOXO3O43524 673 aa24.21■■□□□ 1.47
CMTM4-201ENST00000330687 UBTFL1P0CB47 393 aaPredicted RBP24.2■■□□□ 1.47
CMTM4-201ENST00000330687 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.47
CMTM4-201ENST00000330687 PTPN21Q16825 1174 aa24.2■■□□□ 1.47
CMTM4-201ENST00000330687 WAPLQ7Z5K2 1190 aa24.2■■□□□ 1.47
CMTM4-201ENST00000330687 AOPEPQ8N6M6 819 aa24.2■■□□□ 1.47
CMTM4-201ENST00000330687 DDX19AQ9NUU7 478 aaKnown RBP24.2■■□□□ 1.47
CMTM4-201ENST00000330687 ARGLU1Q9NWB6 273 aaPredicted RBP24.2■■□□□ 1.47
CMTM4-201ENST00000330687 IL13P35225 146 aa24.2■■□□□ 1.46
CMTM4-201ENST00000330687 COL9A3Q14050 684 aaPredicted RBP24.2■■□□□ 1.46
CMTM4-201ENST00000330687 LEO1Q8WVC0 666 aaPredicted RBP24.2■■□□□ 1.46
CMTM4-201ENST00000330687 RASSF4Q9H2L5 321 aa24.2■■□□□ 1.46
CMTM4-201ENST00000330687 TMC6Q7Z403 805 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 ZSWIM4Q9H7M6 989 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 TPCN1Q9ULQ1 816 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 FAM135BQ49AJ0 1406 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 MLECQ14165 292 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 ISM2Q6H9L7 571 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 SMARCE1Q969G3 411 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 TDRD7Q8NHU6 1098 aaKnown RBP24.19■■□□□ 1.46
CMTM4-201ENST00000330687 CLSTN2Q9H4D0 955 aa24.19■■□□□ 1.46
CMTM4-201ENST00000330687 ANKRD65E5RJM6 399 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 FTOQ9C0B1 505 aaKnown RBP eCLIP24.18■■□□□ 1.46
CMTM4-201ENST00000330687 SCAND2PQ9GZW5 306 aaPredicted RBP24.18■■□□□ 1.46
CMTM4-201ENST00000330687 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 BIN1O00499 593 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 SRGAP3O43295 1099 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 TPM4P67936 248 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 PTPRCP08575 1304 aa24.18■■□□□ 1.46
CMTM4-201ENST00000330687 GNAI3P08754 354 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 GPS2Q13227 327 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 LCMT1Q9UIC8 334 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 LSG1Q9H089 658 aaKnown RBP24.17■■□□□ 1.46
CMTM4-201ENST00000330687 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.17■■□□□ 1.46
CMTM4-201ENST00000330687 FHOD1Q9Y613 1164 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 PLA2G4AP47712 749 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 COG3Q96JB2 828 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 KNDC1Q76NI1 1749 aa24.17■■□□□ 1.46
CMTM4-201ENST00000330687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.16■■□□□ 1.46
CMTM4-201ENST00000330687 OAS2P29728 719 aaKnown RBP24.16■■□□□ 1.46
CMTM4-201ENST00000330687 ZSCAN26Q16670 478 aa24.16■■□□□ 1.46
CMTM4-201ENST00000330687 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
CMTM4-201ENST00000330687 SDF4Q9BRK5 362 aa24.16■■□□□ 1.46
CMTM4-201ENST00000330687 TULP2O00295 520 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 JAK2O60674 1132 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 GUCY1B3Q02153 619 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 PPP1R42Q7Z4L9 355 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 CARD6Q9BX69 1037 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 COL3A1P02461 1466 aaPredicted RBP24.15■■□□□ 1.46
CMTM4-201ENST00000330687 ATP8B2P98198 1209 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 PGBD1Q96JS3 809 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 TSPYL1Q9H0U9 437 aa24.15■■□□□ 1.46
CMTM4-201ENST00000330687 GPATCH11Q8N954 259 aa24.14■■□□□ 1.46
CMTM4-201ENST00000330687 KIF1BPQ96EK5 621 aa24.14■■□□□ 1.46
CMTM4-201ENST00000330687 GTF2A1P52655 376 aaPredicted RBP24.14■■□□□ 1.45
CMTM4-201ENST00000330687 NYAP1Q6ZVC0 841 aa24.14■■□□□ 1.45
CMTM4-201ENST00000330687 SIL1Q9H173 461 aa24.14■■□□□ 1.45
CMTM4-201ENST00000330687 MYOM2P54296 1465 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 NRDCO43847 1150 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
CMTM4-201ENST00000330687 FLIIQ13045 1269 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 PLCH2O75038 1416 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 QRICH2Q9H0J4 1663 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 KINO60870 393 aaKnown RBP24.13■■□□□ 1.45
CMTM4-201ENST00000330687 PDCP20941 246 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 SFPQP23246 707 aaKnown RBP eCLIP24.13■■□□□ 1.45
CMTM4-201ENST00000330687 CCDC73Q6ZRK6 1079 aa24.13■■□□□ 1.45
CMTM4-201ENST00000330687 ZSCAN31Q96LW9 406 aaPredicted RBP24.13■■□□□ 1.45
CMTM4-201ENST00000330687 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms