RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PCGF6Q9BYE7 350 aa8.82□□□□□ -1
SMG1-201ENST00000330588 RGPD5Q99666 1765 aa8.82□□□□□ -1
SMG1-201ENST00000330588 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
SMG1-201ENST00000330588 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
SMG1-201ENST00000330588 NME9Q86XW9 330 aa8.82□□□□□ -1
SMG1-201ENST00000330588 OVOS2A0A0G2JMS6 1433 aa8.81□□□□□ -1
SMG1-201ENST00000330588 GPR37O15354 613 aa8.81□□□□□ -1
SMG1-201ENST00000330588 SLC19A1P41440 591 aa8.81□□□□□ -1
SMG1-201ENST00000330588 ADH1BP00325 375 aa8.8□□□□□ -1
SMG1-201ENST00000330588 PDE3BQ13370 1112 aa8.8□□□□□ -1
SMG1-201ENST00000330588 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
SMG1-201ENST00000330588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
SMG1-201ENST00000330588 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
SMG1-201ENST00000330588 COG3Q96JB2 828 aa8.8□□□□□ -1
SMG1-201ENST00000330588 RREB1Q92766 1687 aa8.8□□□□□ -1
SMG1-201ENST00000330588 TNS2Q63HR2 1409 aa8.79□□□□□ -1
SMG1-201ENST00000330588 NR1I2O75469 434 aa8.79□□□□□ -1
SMG1-201ENST00000330588 S1PR4O95977 384 aa8.79□□□□□ -1
SMG1-201ENST00000330588 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
SMG1-201ENST00000330588 RBM26Q5T8P6 1007 aaKnown RBP8.79□□□□□ -1
SMG1-201ENST00000330588 IP6K1Q92551 441 aa8.79□□□□□ -1
SMG1-201ENST00000330588 ANKRD26Q9UPS8 1709 aa8.79□□□□□ -1
SMG1-201ENST00000330588 SBF2Q86WG5 1849 aa8.79□□□□□ -1
SMG1-201ENST00000330588 LRP5O75197 1615 aa8.78□□□□□ -1
SMG1-201ENST00000330588 SPRYD7Q5W111 196 aa8.78□□□□□ -1
SMG1-201ENST00000330588 FYB1O15117 783 aa8.78□□□□□ -1
SMG1-201ENST00000330588 DDB1Q16531 1140 aa8.78□□□□□ -1
SMG1-201ENST00000330588 USP35Q9P2H5 1018 aa8.78□□□□□ -1
SMG1-201ENST00000330588 PLEKHG2Q9H7P9 1386 aa8.78□□□□□ -1
SMG1-201ENST00000330588 PPEF1O14829 653 aaPredicted RBP8.77□□□□□ -1.01
SMG1-201ENST00000330588 GNPATO15228 680 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 FECHP22830 423 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 PRR20EP86478 221 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 PRR20CP86479 221 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 PRR20DP86480 221 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 PRR20BP86481 221 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 PRR20AP86496 221 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
SMG1-201ENST00000330588 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
SMG1-201ENST00000330588 NSD2O96028 1365 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 NUP188Q5SRE5 1749 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 PLSCR1O15162 318 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 CAMKK2Q96RR4 588 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 NSD3Q9BZ95 1437 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 NHSQ6T4R5 1651 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 MAP3K19Q56UN5 1328 aa8.76□□□□□ -1.01
SMG1-201ENST00000330588 FLT4P35916 1363 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 IL2RBP14784 551 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 HOXC9P31274 260 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 ANKRD24Q8TF21 1146 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 NCAPD2Q15021 1401 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
SMG1-201ENST00000330588 INSRP06213 1382 aa8.75□□□□□ -1.01
SMG1-201ENST00000330588 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
SMG1-201ENST00000330588 EXOC5O00471 708 aa8.74□□□□□ -1.01
SMG1-201ENST00000330588 TRIM37O94972 964 aa8.74□□□□□ -1.01
SMG1-201ENST00000330588 HSPA5P11021 654 aaKnown RBP8.73□□□□□ -1.01
SMG1-201ENST00000330588 CARD14Q9BXL6 1004 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 APBA3O96018 575 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 AMPHP49418 695 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 ERICH6Q7L0X2 663 aa8.73□□□□□ -1.01
SMG1-201ENST00000330588 MARCH10Q8NA82 808 aaPredicted RBP8.73□□□□□ -1.01
SMG1-201ENST00000330588 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
SMG1-201ENST00000330588 GDF9O60383 454 aa8.72□□□□□ -1.01
SMG1-201ENST00000330588 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
SMG1-201ENST00000330588 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
SMG1-201ENST00000330588 SHANK3Q9BYB0 1731 aa8.71□□□□□ -1.01
SMG1-201ENST00000330588 DGAT1O75907 488 aa8.71□□□□□ -1.02
SMG1-201ENST00000330588 MORN1Q5T089 497 aa8.71□□□□□ -1.02
SMG1-201ENST00000330588 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
SMG1-201ENST00000330588 EZH2Q15910 746 aaKnown RBP8.7□□□□□ -1.02
SMG1-201ENST00000330588 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
SMG1-201ENST00000330588 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
SMG1-201ENST00000330588 SPSB2Q99619 263 aa8.7□□□□□ -1.02
SMG1-201ENST00000330588 WASHC2AQ641Q2 1341 aa8.7□□□□□ -1.02
SMG1-201ENST00000330588 PKD1L3Q7Z443 1732 aa8.7□□□□□ -1.02
SMG1-201ENST00000330588 HMGB2P26583 209 aaKnown RBP8.69□□□□□ -1.02
SMG1-201ENST00000330588 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
SMG1-201ENST00000330588 ZNF787Q6DD87 383 aa8.69□□□□□ -1.02
SMG1-201ENST00000330588 RGPD2P0DJD1 1756 aa8.69□□□□□ -1.02
SMG1-201ENST00000330588 MAP2P11137 1827 aaKnown RBP8.69□□□□□ -1.02
SMG1-201ENST00000330588 RRS1Q15050 365 aaKnown RBP8.69□□□□□ -1.02
SMG1-201ENST00000330588 NPC1L1Q9UHC9 1359 aa8.69□□□□□ -1.02
SMG1-201ENST00000330588 MEGF6O75095 1541 aa8.68□□□□□ -1.02
SMG1-201ENST00000330588 PAPPAQ13219 1627 aa8.68□□□□□ -1.02
SMG1-201ENST00000330588 BTAF1O14981 1849 aa8.68□□□□□ -1.02
SMG1-201ENST00000330588 GCGRP47871 477 aa8.68□□□□□ -1.02
SMG1-201ENST00000330588 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
SMG1-201ENST00000330588 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 FUT2Q10981 343 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms