RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 JARID2Q92833 1246 aaPredicted RBP16.39■□□□□ 0.21
EPHB3-201ENST00000330394 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
EPHB3-201ENST00000330394 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
EPHB3-201ENST00000330394 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
EPHB3-201ENST00000330394 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
EPHB3-201ENST00000330394 PDIA4P13667 645 aaKnown RBP16.39■□□□□ 0.21
EPHB3-201ENST00000330394 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
EPHB3-201ENST00000330394 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
EPHB3-201ENST00000330394 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
EPHB3-201ENST00000330394 ARHGEF12Q9NZN5 1544 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 ZSCAN12O43309 604 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 GSDMDP57764 484 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 G2E3Q7L622 706 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
EPHB3-201ENST00000330394 CENPHQ9H3R5 247 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 NSD2O96028 1365 aa16.38■□□□□ 0.21
EPHB3-201ENST00000330394 CTAGE5O15320 804 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
EPHB3-201ENST00000330394 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
EPHB3-201ENST00000330394 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
EPHB3-201ENST00000330394 CASQ1P31415 396 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
EPHB3-201ENST00000330394 MCM6Q14566 821 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 DEF6Q9H4E7 631 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
EPHB3-201ENST00000330394 FOXO3O43524 673 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 RDXP35241 583 aaKnown RBP16.36■□□□□ 0.21
EPHB3-201ENST00000330394 DHX8Q14562 1220 aaKnown RBP16.36■□□□□ 0.21
EPHB3-201ENST00000330394 EVI5LQ96CN4 794 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 NUP160Q12769 1436 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 SYT10Q6XYQ8 523 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
EPHB3-201ENST00000330394 HAND2P61296 217 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
EPHB3-201ENST00000330394 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 RAD21O60216 631 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 LRMPQ12912 555 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 FEZ1Q99689 392 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
EPHB3-201ENST00000330394 BRD1O95696 1058 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 KIF20AO95235 890 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 XBP1P17861 261 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
EPHB3-201ENST00000330394 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
EPHB3-201ENST00000330394 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
EPHB3-201ENST00000330394 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
EPHB3-201ENST00000330394 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
EPHB3-201ENST00000330394 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.21
EPHB3-201ENST00000330394 CCDC12Q8WUD4 166 aaPredicted RBP16.33■□□□□ 0.21
EPHB3-201ENST00000330394 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.21
EPHB3-201ENST00000330394 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
EPHB3-201ENST00000330394 LIG1P18858 919 aa16.33■□□□□ 0.2
EPHB3-201ENST00000330394 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
EPHB3-201ENST00000330394 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
EPHB3-201ENST00000330394 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.2
EPHB3-201ENST00000330394 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
EPHB3-201ENST00000330394 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
EPHB3-201ENST00000330394 KIAA0556O60303 1618 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 KIAA0754O94854 1291 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 KIF5CO60282 957 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 ELF2Q15723 593 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 MSH6P52701 1360 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
EPHB3-201ENST00000330394 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
EPHB3-201ENST00000330394 CCDC144CPQ8IYA2 1237 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
EPHB3-201ENST00000330394 ZNHIT6Q9NWK9 470 aaKnown RBP16.32■□□□□ 0.2
EPHB3-201ENST00000330394 PHACTR2O75167 634 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 UBASH3AP57075 661 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 IPO4Q8TEX9 1081 aaKnown RBP16.31■□□□□ 0.2
EPHB3-201ENST00000330394 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
EPHB3-201ENST00000330394 INSRP06213 1382 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 ARFGAP3Q9NP61 516 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 CAVIN2O95810 425 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 GPATCH11Q8N954 259 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 MYD88Q99836 296 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
EPHB3-201ENST00000330394 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms