RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
TPM3-205ENST00000328159 A1BGP04217 495 aa18.43■□□□□ 0.54
TPM3-205ENST00000328159 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
TPM3-205ENST00000328159 GCKRQ14397 625 aa18.43■□□□□ 0.54
TPM3-205ENST00000328159 HSP90AB4PQ58FF6 505 aa18.43■□□□□ 0.54
TPM3-205ENST00000328159 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
TPM3-205ENST00000328159 SDSP20132 328 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 NUP188Q5SRE5 1749 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 MX1P20591 662 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
TPM3-205ENST00000328159 BCL9O00512 1426 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 SLIT2O94813 1529 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 KIF1BPQ96EK5 621 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 STAP2Q9UGK3 403 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 KAT6BQ8WYB5 2073 aa18.41■□□□□ 0.54
TPM3-205ENST00000328159 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
TPM3-205ENST00000328159 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
TPM3-205ENST00000328159 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
TPM3-205ENST00000328159 IL1RAPL2Q9NP60 686 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 SPATA31A5Q5VU36 1347 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 SPATA31A7Q8IWB4 1347 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 DOT1LQ8TEK3 1739 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
TPM3-205ENST00000328159 BECN1Q14457 450 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
TPM3-205ENST00000328159 AOX1Q06278 1338 aa18.39■□□□□ 0.53
TPM3-205ENST00000328159 OS9Q13438 667 aaPredicted RBP18.38■□□□□ 0.53
TPM3-205ENST00000328159 ATP5J2-PTCD1G3V325 749 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 DDB1Q16531 1140 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
TPM3-205ENST00000328159 COL15A1P39059 1388 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
TPM3-205ENST00000328159 ERC1Q8IUD2 1116 aa18.36■□□□□ 0.53
TPM3-205ENST00000328159 PA2G4Q9UQ80 394 aaKnown RBP18.36■□□□□ 0.53
TPM3-205ENST00000328159 STARD3NLO95772 234 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
TPM3-205ENST00000328159 JCADQ9P266 1359 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 A0A087WZG4 1122 aa18.35■□□□□ 0.53
TPM3-205ENST00000328159 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
TPM3-205ENST00000328159 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
TPM3-205ENST00000328159 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
TPM3-205ENST00000328159 TJP1Q07157 1748 aa18.34■□□□□ 0.53
TPM3-205ENST00000328159 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.34■□□□□ 0.53
TPM3-205ENST00000328159 CASP7P55210 303 aa18.34■□□□□ 0.53
TPM3-205ENST00000328159 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
TPM3-205ENST00000328159 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
TPM3-205ENST00000328159 H7C1W4 665 aa18.32■□□□□ 0.52
TPM3-205ENST00000328159 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■□□ 15.4
TPM3-205ENST00000328159 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
TPM3-205ENST00000328159 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
TPM3-205ENST00000328159 CLASRPQ8N2M8 674 aaKnown RBP18.32■□□□□ 0.52
TPM3-205ENST00000328159 SLC4A9Q96Q91 983 aa18.32■□□□□ 0.52
TPM3-205ENST00000328159 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
TPM3-205ENST00000328159 MARCH10Q8NA82 808 aaPredicted RBP18.32■□□□□ 0.52
TPM3-205ENST00000328159 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
TPM3-205ENST00000328159 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
TPM3-205ENST00000328159 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
TPM3-205ENST00000328159 CCDC191Q8NCU4 936 aa18.31■□□□□ 0.52
TPM3-205ENST00000328159 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
TPM3-205ENST00000328159 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 KIF6Q6ZMV9 814 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 ZNF330Q9Y3S2 320 aaPredicted RBP18.3■□□□□ 0.52
TPM3-205ENST00000328159 TTC41PQ6P2S7 1318 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 SASH1O94885 1247 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 RILPL2Q969X0 211 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
TPM3-205ENST00000328159 ERC2O15083 957 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
TPM3-205ENST00000328159 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 KIF2CQ99661 725 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 BCL9LQ86UU0 1499 aa18.29■□□□□ 0.52
TPM3-205ENST00000328159 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
TPM3-205ENST00000328159 VPS72Q15906 364 aa18.28■□□□□ 0.52
TPM3-205ENST00000328159 SIL1Q9H173 461 aa18.28■□□□□ 0.52
TPM3-205ENST00000328159 REC8O95072 547 aa18.27■□□□□ 0.52
TPM3-205ENST00000328159 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.52
TPM3-205ENST00000328159 FOXO4P98177 505 aa18.27■□□□□ 0.52
TPM3-205ENST00000328159 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
TPM3-205ENST00000328159 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
TPM3-205ENST00000328159 CHMLP26374 656 aa18.27■□□□□ 0.51
TPM3-205ENST00000328159 AACSQ86V21 672 aa18.27■□□□□ 0.51
TPM3-205ENST00000328159 GPATCH3Q96I76 525 aa18.27■□□□□ 0.51
TPM3-205ENST00000328159 ESYT1Q9BSJ8 1104 aa18.27■□□□□ 0.51
TPM3-205ENST00000328159 MAP3K15Q6ZN16 1313 aa18.26■□□□□ 0.51
TPM3-205ENST00000328159 A0A0G2JS52 829 aa18.26■□□□□ 0.51
TPM3-205ENST00000328159 GLRX3O76003 335 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms