RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
CHRNA3-201ENST00000326828 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 CBX8Q9HC52 389 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 KRT85P78386 507 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
CHRNA3-201ENST00000326828 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
CHRNA3-201ENST00000326828 RAB11FIP3O75154 756 aa17■□□□□ 0.31
CHRNA3-201ENST00000326828 GTPBP4Q9BZE4 634 aaKnown RBP17■□□□□ 0.31
CHRNA3-201ENST00000326828 ACEP12821 1306 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 ZBTB22O15209 634 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 CCDC112Q8NEF3 446 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 TPCN1Q9ULQ1 816 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
CHRNA3-201ENST00000326828 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 METP08581 1390 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 ERCC4Q92889 916 aaPredicted RBP16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 EYA1Q99502 592 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 CRB1P82279 1406 aa16.98■□□□□ 0.31
CHRNA3-201ENST00000326828 ATP7BP35670 1465 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 CCDC9Q9Y3X0 531 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 ZNF165P49910 485 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
CHRNA3-201ENST00000326828 TAF6LQ9Y6J9 622 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 MLH3Q9UHC1 1453 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 NR1I2O75469 434 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 CACTINQ8WUQ7 758 aaKnown RBP16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 CCDC144BQ3MJ40 725 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 ANKRD7Q92527 254 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 SIL1Q9H173 461 aa16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
CHRNA3-201ENST00000326828 USP27XA6NNY8 438 aa16.95■□□□□ 0.3
CHRNA3-201ENST00000326828 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
CHRNA3-201ENST00000326828 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
CHRNA3-201ENST00000326828 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
CHRNA3-201ENST00000326828 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
CHRNA3-201ENST00000326828 TPM3P06753 285 aa16.94■□□□□ 0.3
CHRNA3-201ENST00000326828 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
CHRNA3-201ENST00000326828 AACSQ86V21 672 aa16.94■□□□□ 0.3
CHRNA3-201ENST00000326828 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
CHRNA3-201ENST00000326828 ZNF75DP51815 510 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 USP16Q9Y5T5 823 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 JAK2O60674 1132 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 KIF20AO95235 890 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 RUFY2Q8WXA3 655 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
CHRNA3-201ENST00000326828 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 CEP135Q66GS9 1140 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 ST7Q9NRC1 585 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 CTIFO43310 598 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 FTOQ9C0B1 505 aaKnown RBP eCLIP16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 NDUFB9Q9Y6M9 179 aa16.92■□□□□ 0.3
CHRNA3-201ENST00000326828 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 BBXQ8WY36 941 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 SMTNL1A8MU46 457 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 FGD1P98174 961 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 CTNNA3Q9UI47 895 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 H3BQV1 296 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
CHRNA3-201ENST00000326828 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms