RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 NOL7Q9UMY1 257 aaKnown RBP24■■□□□ 1.43
SOX2-201ENST00000325404 CPDO75976 1380 aa24■■□□□ 1.43
SOX2-201ENST00000325404 MSNP26038 577 aaKnown RBP24■■□□□ 1.43
SOX2-201ENST00000325404 CHPF2Q9P2E5 772 aa24■■□□□ 1.43
SOX2-201ENST00000325404 ALDH1L1O75891 902 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 TPM2P07951 284 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 NBPF7P0C2Y1 421 aaPredicted RBP23.99■■□□□ 1.43
SOX2-201ENST00000325404 MCM5P33992 734 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 TTC14Q96N46 770 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 IL25Q9H293 177 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 NLRP2Q9NX02 1062 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 PI4KAP2A4QPH2 592 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 GLRX3O76003 335 aaKnown RBP23.99■■□□□ 1.43
SOX2-201ENST00000325404 PI4KAP1Q8N8J0 262 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 UPF3BQ9BZI7 483 aaKnown RBP23.99■■□□□ 1.43
SOX2-201ENST00000325404 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
SOX2-201ENST00000325404 COL18A1P39060 1754 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 PHF14O94880 888 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 TERF1P54274 439 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 NSFL1CQ9UNZ2 370 aaKnown RBP23.98■■□□□ 1.43
SOX2-201ENST00000325404 SNX14Q9Y5W7 946 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 SYCE3A1L190 88 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 OFD1O75665 1012 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 EIF2S2P20042 333 aaKnown RBP23.98■■□□□ 1.43
SOX2-201ENST00000325404 CHRNA2Q15822 529 aa23.98■■□□□ 1.43
SOX2-201ENST00000325404 DBF4Q9UBU7 674 aaPredicted RBP23.98■■□□□ 1.43
SOX2-201ENST00000325404 ADCY9O60503 1353 aa23.97■■□□□ 1.43
SOX2-201ENST00000325404 CSB-PGBD3P0DP91 1061 aa23.97■■□□□ 1.43
SOX2-201ENST00000325404 ZNF500O60304 480 aaPredicted RBP23.97■■□□□ 1.43
SOX2-201ENST00000325404 TEFQ10587 303 aa23.97■■□□□ 1.43
SOX2-201ENST00000325404 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
SOX2-201ENST00000325404 KIAA1211Q6ZU35 1233 aa23.96■■□□□ 1.43
SOX2-201ENST00000325404 RUFY2Q8WXA3 655 aa23.96■■□□□ 1.43
SOX2-201ENST00000325404 ERC1Q8IUD2 1116 aa23.95■■□□□ 1.43
SOX2-201ENST00000325404 HEG1Q9ULI3 1381 aa23.95■■□□□ 1.43
SOX2-201ENST00000325404 BTBD11A6QL63 1104 aa23.95■■□□□ 1.42
SOX2-201ENST00000325404 MPRIPQ6WCQ1 1025 aa23.95■■□□□ 1.42
SOX2-201ENST00000325404 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.94■■□□□ 1.42
SOX2-201ENST00000325404 KCNB2Q92953 911 aa23.94■■□□□ 1.42
SOX2-201ENST00000325404 LIMCH1Q9UPQ0 1083 aa23.94■■□□□ 1.42
SOX2-201ENST00000325404 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.94■■□□□ 1.42
SOX2-201ENST00000325404 CHAMP1Q96JM3 812 aa23.94■■□□□ 1.42
SOX2-201ENST00000325404 RNMTO43148 476 aaKnown RBP23.93■■□□□ 1.42
SOX2-201ENST00000325404 FOXD4L5Q5VV16 416 aaPredicted RBP23.93■■□□□ 1.42
SOX2-201ENST00000325404 FOXD4L4Q8WXT5 416 aaPredicted RBP23.93■■□□□ 1.42
SOX2-201ENST00000325404 TSPY26PQ9H489 355 aa23.93■■□□□ 1.42
SOX2-201ENST00000325404 CLASRPQ8N2M8 674 aaKnown RBP23.93■■□□□ 1.42
SOX2-201ENST00000325404 TM6SF1Q9BZW5 370 aa23.93■■□□□ 1.42
SOX2-201ENST00000325404 RPAP1Q9BWH6 1393 aaPredicted RBP23.93■■□□□ 1.42
SOX2-201ENST00000325404 TATP17735 454 aaPredicted RBP23.92■■□□□ 1.42
SOX2-201ENST00000325404 NOL8Q76FK4 1167 aaKnown RBP23.92■■□□□ 1.42
SOX2-201ENST00000325404 GPATCH3Q96I76 525 aa23.92■■□□□ 1.42
SOX2-201ENST00000325404 CCDC39Q9UFE4 941 aa23.92■■□□□ 1.42
SOX2-201ENST00000325404 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
SOX2-201ENST00000325404 FAM184AQ8NB25 1140 aa23.91■■□□□ 1.42
SOX2-201ENST00000325404 ECHDC1Q9NTX5 307 aa23.91■■□□□ 1.42
SOX2-201ENST00000325404 RRP9O43818 475 aaKnown RBP23.9■■□□□ 1.42
SOX2-201ENST00000325404 USP48Q86UV5 1035 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 ATP6V1DQ9Y5K8 247 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 KCNQ3O43525 872 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 LETM1O95202 739 aaPredicted RBP23.9■■□□□ 1.42
SOX2-201ENST00000325404 ZSCAN22P10073 491 aaPredicted RBP23.9■■□□□ 1.42
SOX2-201ENST00000325404 ZKSCAN5Q9Y2L8 839 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 UTYO14607 1347 aa23.9■■□□□ 1.42
SOX2-201ENST00000325404 MAP4K4O95819 1239 aaPredicted RBP23.89■■□□□ 1.42
SOX2-201ENST00000325404 AK2P54819 239 aa23.89■■□□□ 1.42
SOX2-201ENST00000325404 UVSSAQ2YD98 709 aa23.89■■□□□ 1.42
SOX2-201ENST00000325404 RASEFQ8IZ41 740 aa23.89■■□□□ 1.42
SOX2-201ENST00000325404 ZSCAN31Q96LW9 406 aaPredicted RBP23.89■■□□□ 1.42
SOX2-201ENST00000325404 DIAPH3Q9NSV4 1193 aa23.89■■□□□ 1.41
SOX2-201ENST00000325404 PLEKHG2Q9H7P9 1386 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
SOX2-201ENST00000325404 PDIA4P13667 645 aaKnown RBP23.88■■□□□ 1.41
SOX2-201ENST00000325404 OS9Q13438 667 aaPredicted RBP23.88■■□□□ 1.41
SOX2-201ENST00000325404 VPS53Q5VIR6 699 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 RUFY3Q7L099 469 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 UBE2Q2Q8WVN8 375 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.88■■□□□ 1.41
SOX2-201ENST00000325404 SPG7Q9UQ90 795 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 EVI5LQ96CN4 794 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 HYPKQ9NX55 129 aa23.88■■□□□ 1.41
SOX2-201ENST00000325404 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.88■■□□□ 1.41
SOX2-201ENST00000325404 CWC27Q6UX04 472 aaKnown RBP23.87■■□□□ 1.41
SOX2-201ENST00000325404 SH2B1Q9NRF2 756 aaPredicted RBP23.87■■□□□ 1.41
SOX2-201ENST00000325404 MEGF6O75095 1541 aa23.87■■□□□ 1.41
SOX2-201ENST00000325404 HIP1O00291 1037 aa23.87■■□□□ 1.41
SOX2-201ENST00000325404 C9orf78Q9NZ63 289 aaPredicted RBP23.87■■□□□ 1.41
SOX2-201ENST00000325404 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
SOX2-201ENST00000325404 STX6O43752 255 aa23.86■■□□□ 1.41
SOX2-201ENST00000325404 SNRKQ9NRH2 765 aa23.86■■□□□ 1.41
SOX2-201ENST00000325404 MAP3K2Q9Y2U5 619 aa23.86■■□□□ 1.41
SOX2-201ENST00000325404 ZSWIM6Q9HCJ5 1215 aa23.86■■□□□ 1.41
SOX2-201ENST00000325404 CSPP1Q1MSJ5 1256 aa23.85■■□□□ 1.41
SOX2-201ENST00000325404 CCDC183Q5T5S1 534 aa23.85■■□□□ 1.41
SOX2-201ENST00000325404 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
SOX2-201ENST00000325404 SMC3Q9UQE7 1217 aa23.85■■□□□ 1.41
SOX2-201ENST00000325404 ADAMTS7Q9UKP4 1686 aa23.85■■□□□ 1.41
SOX2-201ENST00000325404 GADD45BO75293 160 aaPredicted RBP23.85■■□□□ 1.41
SOX2-201ENST00000325404 IFIT2P09913 472 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms