RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 KCNQ2O43526 872 aa11.23□□□□□ -0.61
CD46-202ENST00000322918 PDE1AP54750 535 aa11.23□□□□□ -0.61
CD46-202ENST00000322918 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
CD46-202ENST00000322918 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
CD46-202ENST00000322918 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 MX1P20591 662 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 GCKRQ14397 625 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 METTL22Q9BUU2 404 aaPredicted RBP11.22□□□□□ -0.61
CD46-202ENST00000322918 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.22□□□□□ -0.61
CD46-202ENST00000322918 VIRMAQ69YN4 1812 aaKnown RBP11.22□□□□□ -0.61
CD46-202ENST00000322918 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
CD46-202ENST00000322918 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
CD46-202ENST00000322918 UNC5CLQ8IV45 518 aa11.21□□□□□ -0.61
CD46-202ENST00000322918 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
CD46-202ENST00000322918 CDC45O75419 566 aa11.21□□□□□ -0.62
CD46-202ENST00000322918 SYNE4Q8N205 404 aa11.21□□□□□ -0.62
CD46-202ENST00000322918 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.62
CD46-202ENST00000322918 LTBP4Q8N2S1 1624 aa11.21□□□□□ -0.62
CD46-202ENST00000322918 ALDH1L1O75891 902 aa11.2□□□□□ -0.62
CD46-202ENST00000322918 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
CD46-202ENST00000322918 LRP10Q7Z4F1 713 aa11.2□□□□□ -0.62
CD46-202ENST00000322918 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
CD46-202ENST00000322918 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
CD46-202ENST00000322918 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
CD46-202ENST00000322918 SCN11AQ9UI33 1791 aa11.2□□□□□ -0.62
CD46-202ENST00000322918 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 G3BP1Q13283 466 aaKnown RBP eCLIP11.19□□□□□ -0.62
CD46-202ENST00000322918 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 AACSQ86V21 672 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 FAM89AQ96GI7 184 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
CD46-202ENST00000322918 STARD3NLO95772 234 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 C5P01031 1676 aa11.19□□□□□ -0.62
CD46-202ENST00000322918 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
CD46-202ENST00000322918 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
CD46-202ENST00000322918 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
CD46-202ENST00000322918 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
CD46-202ENST00000322918 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
CD46-202ENST00000322918 POLA2Q14181 598 aa11.18□□□□□ -0.62
CD46-202ENST00000322918 HLFQ16534 295 aa11.18□□□□□ -0.62
CD46-202ENST00000322918 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
CD46-202ENST00000322918 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
CD46-202ENST00000322918 PHLPP1O60346 1717 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 HSPA1LP34931 641 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 NOL8Q76FK4 1167 aaKnown RBP11.17□□□□□ -0.62
CD46-202ENST00000322918 USP21Q9UK80 565 aa11.17□□□□□ -0.62
CD46-202ENST00000322918 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
CD46-202ENST00000322918 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
CD46-202ENST00000322918 BECN1Q14457 450 aa11.16□□□□□ -0.62
CD46-202ENST00000322918 GSE1Q14687 1217 aa11.16□□□□□ -0.62
CD46-202ENST00000322918 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
CD46-202ENST00000322918 SASH1O94885 1247 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 SPATA31A5Q5VU36 1347 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 SPATA31A7Q8IWB4 1347 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 SIPA1L3O60292 1781 aaPredicted RBP11.15□□□□□ -0.62
CD46-202ENST00000322918 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
CD46-202ENST00000322918 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.63
CD46-202ENST00000322918 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.63
CD46-202ENST00000322918 EDC3Q96F86 508 aaKnown RBP11.15□□□□□ -0.63
CD46-202ENST00000322918 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.63
CD46-202ENST00000322918 PARP4Q9UKK3 1724 aaKnown RBP11.15□□□□□ -0.63
CD46-202ENST00000322918 TFCP2Q12800 502 aa11.14□□□□□ -0.63
CD46-202ENST00000322918 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
CD46-202ENST00000322918 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
CD46-202ENST00000322918 RAB11FIP3O75154 756 aa11.14□□□□□ -0.63
CD46-202ENST00000322918 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
CD46-202ENST00000322918 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
CD46-202ENST00000322918 BICDL1Q6ZP65 573 aa11.14□□□□□ -0.63
CD46-202ENST00000322918 IL25Q9H293 177 aa11.14□□□□□ -0.63
CD46-202ENST00000322918 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
CD46-202ENST00000322918 ABCC6O95255 1503 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 MRC1P22897 1456 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
CD46-202ENST00000322918 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 SIK1P57059 783 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
CD46-202ENST00000322918 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
CD46-202ENST00000322918 BCL9O00512 1426 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 LRRC24Q50LG9 513 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
CD46-202ENST00000322918 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
CD46-202ENST00000322918 TIMM10P62072 90 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 PTPN12Q05209 780 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms