RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
ZNF543-201ENST00000321545 HSP90AB4PQ58FF6 505 aa13.83□□□□□ -0.2
ZNF543-201ENST00000321545 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
ZNF543-201ENST00000321545 SYNE4Q8N205 404 aa13.83□□□□□ -0.2
ZNF543-201ENST00000321545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF543-201ENST00000321545 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 ERVV-2B6SEH9 535 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
ZNF543-201ENST00000321545 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
ZNF543-201ENST00000321545 GNPATO15228 680 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
ZNF543-201ENST00000321545 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
ZNF543-201ENST00000321545 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
ZNF543-201ENST00000321545 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
ZNF543-201ENST00000321545 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
ZNF543-201ENST00000321545 PIK3C2AO00443 1686 aa13.81□□□□□ -0.2
ZNF543-201ENST00000321545 CHD2O14647 1828 aaKnown RBP13.81□□□□□ -0.2
ZNF543-201ENST00000321545 ZPR1O75312 459 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
ZNF543-201ENST00000321545 AFF2P51816 1311 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 GCKRQ14397 625 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 MCCP23508 829 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
ZNF543-201ENST00000321545 CEP126Q9P2H0 1117 aa13.8□□□□□ -0.2
ZNF543-201ENST00000321545 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 NEURL1BA8MQ27 555 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 SDSP20132 328 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 SIK1P57059 783 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
ZNF543-201ENST00000321545 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
ZNF543-201ENST00000321545 TRIM37O94972 964 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 BABAM1Q9NWV8 329 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 KNDC1Q76NI1 1749 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
ZNF543-201ENST00000321545 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
ZNF543-201ENST00000321545 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 NBPF10Q6P3W6 841 aaKnown RBP13.79□□□□□ -0.2
ZNF543-201ENST00000321545 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 NBPF15Q8N660 670 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
ZNF543-201ENST00000321545 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 ERC2O15083 957 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 HOXB7P09629 217 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 PDE1AP54750 535 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 TIMM10P62072 90 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
ZNF543-201ENST00000321545 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 AK7Q96M32 723 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 DCCP43146 1447 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 APPP05067 770 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
ZNF543-201ENST00000321545 DTNBO60941 627 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 ALDH1L1O75891 902 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
ZNF543-201ENST00000321545 ZMYND15Q9H091 742 aa13.78□□□□□ -0.2
ZNF543-201ENST00000321545 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.2
ZNF543-201ENST00000321545 SEPT12Q8IYM1 358 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.21
ZNF543-201ENST00000321545 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
ZNF543-201ENST00000321545 NRKQ7Z2Y5 1582 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 HLFQ16534 295 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 PTF1AQ7RTS3 328 aa13.77□□□□□ -0.21
ZNF543-201ENST00000321545 RFC4P35249 363 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 DDX46Q7L014 1031 aaKnown RBP13.76□□□□□ -0.21
ZNF543-201ENST00000321545 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 REC8O95072 547 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 TFCP2Q12800 502 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 EPHA10Q5JZY3 1008 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
ZNF543-201ENST00000321545 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
ZNF543-201ENST00000321545 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
ZNF543-201ENST00000321545 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
ZNF543-201ENST00000321545 TTC22Q5TAA0 569 aa13.75□□□□□ -0.21
ZNF543-201ENST00000321545 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
ZNF543-201ENST00000321545 JAG2Q9Y219 1238 aa13.75□□□□□ -0.21
ZNF543-201ENST00000321545 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 NEK4P51957 841 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 KDM4AO75164 1064 aa13.74□□□□□ -0.21
ZNF543-201ENST00000321545 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
ZNF543-201ENST00000321545 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms