RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 CLUAP1Q96AJ1 413 aa17.27■□□□□ 0.36
PRPF18-201ENST00000320054 ATP10DQ9P241 1426 aa17.27■□□□□ 0.35
PRPF18-201ENST00000320054 COL15A1P39059 1388 aa17.27■□□□□ 0.35
PRPF18-201ENST00000320054 A0A087WZG4 1122 aa17.26■□□□□ 0.35
PRPF18-201ENST00000320054 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
PRPF18-201ENST00000320054 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
PRPF18-201ENST00000320054 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
PRPF18-201ENST00000320054 F6X3S4 739 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
PRPF18-201ENST00000320054 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 TMEM57Q8N5G2 664 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 AK7Q96M32 723 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
PRPF18-201ENST00000320054 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
PRPF18-201ENST00000320054 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
PRPF18-201ENST00000320054 MAP3K15Q6ZN16 1313 aa17.24■□□□□ 0.35
PRPF18-201ENST00000320054 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
PRPF18-201ENST00000320054 RGL2O15211 777 aa17.24■□□□□ 0.35
PRPF18-201ENST00000320054 GNPATO15228 680 aa17.24■□□□□ 0.35
PRPF18-201ENST00000320054 ADRA2BP18089 450 aa17.24■□□□□ 0.35
PRPF18-201ENST00000320054 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
PRPF18-201ENST00000320054 EZH2Q15910 746 aaKnown RBP17.24■□□□□ 0.35
PRPF18-201ENST00000320054 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
PRPF18-201ENST00000320054 ZNF330Q9Y3S2 320 aaPredicted RBP17.24■□□□□ 0.35
PRPF18-201ENST00000320054 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
PRPF18-201ENST00000320054 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
PRPF18-201ENST00000320054 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
PRPF18-201ENST00000320054 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
PRPF18-201ENST00000320054 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
PRPF18-201ENST00000320054 COG6Q9Y2V7 657 aa17.23■□□□□ 0.35
PRPF18-201ENST00000320054 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
PRPF18-201ENST00000320054 DDX19BQ9UMR2 479 aa17.22■□□□□ 0.35
PRPF18-201ENST00000320054 SSFA2P28290 1259 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 NEXNQ0ZGT2 675 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 AAMPQ13685 434 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
PRPF18-201ENST00000320054 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
PRPF18-201ENST00000320054 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
PRPF18-201ENST00000320054 ZBTB3Q9H5J0 574 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
PRPF18-201ENST00000320054 ALDH1L1O75891 902 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 FKBP8Q14318 412 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 TRAPPC3LQ5T215 181 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
PRPF18-201ENST00000320054 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
PRPF18-201ENST00000320054 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
PRPF18-201ENST00000320054 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
PRPF18-201ENST00000320054 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
PRPF18-201ENST00000320054 ARXQ96QS3 562 aa17.19■□□□□ 0.34
PRPF18-201ENST00000320054 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
PRPF18-201ENST00000320054 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
PRPF18-201ENST00000320054 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 CLEC4GQ6UXB4 293 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 MYD88Q99836 296 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 ISCA1Q9BUE6 129 aa17.18■□□□□ 0.34
PRPF18-201ENST00000320054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
PRPF18-201ENST00000320054 HLFQ16534 295 aa17.17■□□□□ 0.34
PRPF18-201ENST00000320054 COL24A1Q17RW2 1714 aa17.17■□□□□ 0.34
PRPF18-201ENST00000320054 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
PRPF18-201ENST00000320054 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
PRPF18-201ENST00000320054 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
PRPF18-201ENST00000320054 ZPR1O75312 459 aa17.16■□□□□ 0.34
PRPF18-201ENST00000320054 RFC4P35249 363 aa17.16■□□□□ 0.34
PRPF18-201ENST00000320054 CCDC191Q8NCU4 936 aa17.16■□□□□ 0.34
PRPF18-201ENST00000320054 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
PRPF18-201ENST00000320054 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
PRPF18-201ENST00000320054 PHF14O94880 888 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
PRPF18-201ENST00000320054 GNAI3P08754 354 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 GCKRQ14397 625 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
PRPF18-201ENST00000320054 USPL1Q5W0Q7 1092 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
PRPF18-201ENST00000320054 CWC25Q9NXE8 425 aaPredicted RBP17.14■□□□□ 0.33
PRPF18-201ENST00000320054 LAMB2P55268 1798 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 UTYO14607 1347 aa17.14■□□□□ 0.33
PRPF18-201ENST00000320054 MYH3P11055 1940 aa17.13■□□□□ 0.33
PRPF18-201ENST00000320054 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
PRPF18-201ENST00000320054 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
PRPF18-201ENST00000320054 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
PRPF18-201ENST00000320054 GRM8O00222 908 aa17.12■□□□□ 0.33
PRPF18-201ENST00000320054 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
PRPF18-201ENST00000320054 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms