RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 PI4KAP1Q8N8J0 262 aa25.09■■□□□ 1.61
CPNE7-202ENST00000319518 GDPD2Q9HCC8 539 aa25.09■■□□□ 1.61
CPNE7-202ENST00000319518 TNS3Q68CZ2 1445 aa25.09■■□□□ 1.61
CPNE7-202ENST00000319518 GADD45BO75293 160 aaPredicted RBP25.08■■□□□ 1.61
CPNE7-202ENST00000319518 SGSM2O43147 1006 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 SLC39A6Q13433 755 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 SPATA31A3Q5VYP0 1347 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 XIRP1Q702N8 1843 aaKnown RBP25.07■■□□□ 1.6
CPNE7-202ENST00000319518 RPAP1Q9BWH6 1393 aaPredicted RBP25.07■■□□□ 1.6
CPNE7-202ENST00000319518 RAD50Q92878 1312 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 EPB41L2O43491 1005 aaKnown RBP25.07■■□□□ 1.6
CPNE7-202ENST00000319518 GIGYF1O75420 1035 aaPredicted RBP25.07■■□□□ 1.6
CPNE7-202ENST00000319518 HOXB7P09629 217 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 BRINP3Q76B58 766 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 RNF214Q8ND24 703 aa25.07■■□□□ 1.6
CPNE7-202ENST00000319518 MEGF6O75095 1541 aa25.06■■□□□ 1.6
CPNE7-202ENST00000319518 SRGAP3O43295 1099 aa25.06■■□□□ 1.6
CPNE7-202ENST00000319518 COL18A1P39060 1754 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 RASEFQ8IZ41 740 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 LSG1Q9H089 658 aaKnown RBP25.05■■□□□ 1.6
CPNE7-202ENST00000319518 SNX14Q9Y5W7 946 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 KDM4FA0A1W2PPD8 638 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 TPM2P07951 284 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 HSP90AA2PQ14568 343 aaPredicted RBP25.05■■□□□ 1.6
CPNE7-202ENST00000319518 BEND3Q5T5X7 828 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 TTC14Q96N46 770 aa25.05■■□□□ 1.6
CPNE7-202ENST00000319518 ZNF335Q9H4Z2 1342 aaPredicted RBP25.04■■□□□ 1.6
CPNE7-202ENST00000319518 RRP9O43818 475 aaKnown RBP25.04■■□□□ 1.6
CPNE7-202ENST00000319518 ZNF500O60304 480 aaPredicted RBP25.04■■□□□ 1.6
CPNE7-202ENST00000319518 TATP17735 454 aaPredicted RBP25.04■■□□□ 1.6
CPNE7-202ENST00000319518 DNAAF4Q8WXU2 420 aa25.04■■□□□ 1.6
CPNE7-202ENST00000319518 ADCY9O60503 1353 aa25.03■■□□□ 1.6
CPNE7-202ENST00000319518 TCHHQ07283 1943 aa25.03■■□□□ 1.6
CPNE7-202ENST00000319518 USP48Q86UV5 1035 aa25.03■■□□□ 1.6
CPNE7-202ENST00000319518 KIF1BPQ96EK5 621 aa25.03■■□□□ 1.6
CPNE7-202ENST00000319518 KDM6AO15550 1401 aaPredicted RBP25.03■■□□□ 1.6
CPNE7-202ENST00000319518 LARP6Q9BRS8 491 aaKnown RBP25.02■■□□□ 1.6
CPNE7-202ENST00000319518 DBF4Q9UBU7 674 aaPredicted RBP25.02■■□□□ 1.6
CPNE7-202ENST00000319518 PHKG2P15735 406 aa25.02■■□□□ 1.6
CPNE7-202ENST00000319518 NFATC2IPQ8NCF5 419 aa25.02■■□□□ 1.6
CPNE7-202ENST00000319518 ZKSCAN5Q9Y2L8 839 aa25.02■■□□□ 1.6
CPNE7-202ENST00000319518 CRYBG1Q9Y4K1 1723 aa25.02■■□□□ 1.6
CPNE7-202ENST00000319518 WDR33Q9C0J8 1336 aaKnown RBP25.01■■□□□ 1.59
CPNE7-202ENST00000319518 OVOS2A0A0G2JMS6 1433 aa25.01■■□□□ 1.59
CPNE7-202ENST00000319518 LMTK3Q96Q04 1460 aa25.01■■□□□ 1.59
CPNE7-202ENST00000319518 SIPA1L3O60292 1781 aaPredicted RBP25.01■■□□□ 1.59
CPNE7-202ENST00000319518 HEG1Q9ULI3 1381 aa25.01■■□□□ 1.59
CPNE7-202ENST00000319518 STRCQ7RTU9 1775 aa25■■□□□ 1.59
CPNE7-202ENST00000319518 PDZRN4Q6ZMN7 1036 aaPredicted RBP25■■□□□ 1.59
CPNE7-202ENST00000319518 RUFY3Q7L099 469 aa25■■□□□ 1.59
CPNE7-202ENST00000319518 AK2P54819 239 aa25■■□□□ 1.59
CPNE7-202ENST00000319518 TSPY26PQ9H489 355 aa25■■□□□ 1.59
CPNE7-202ENST00000319518 CWC27Q6UX04 472 aaKnown RBP24.99■■□□□ 1.59
CPNE7-202ENST00000319518 SPG7Q9UQ90 795 aa24.99■■□□□ 1.59
CPNE7-202ENST00000319518 MAP3K2Q9Y2U5 619 aa24.99■■□□□ 1.59
CPNE7-202ENST00000319518 CNTROBQ8N137 903 aa24.98■■□□□ 1.59
CPNE7-202ENST00000319518 SLC52A2Q9HAB3 445 aa24.98■■□□□ 1.59
CPNE7-202ENST00000319518 CYP27B1O15528 508 aa24.98■■□□□ 1.59
CPNE7-202ENST00000319518 USP42Q9H9J4 1324 aaKnown RBP24.98■■□□□ 1.59
CPNE7-202ENST00000319518 CPA1P15085 419 aa24.97■■□□□ 1.59
CPNE7-202ENST00000319518 AIMP1Q12904 312 aaKnown RBP24.97■■□□□ 1.59
CPNE7-202ENST00000319518 ZNF790Q6PG37 636 aa24.97■■□□□ 1.59
CPNE7-202ENST00000319518 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
CPNE7-202ENST00000319518 TMEM87AQ8NBN3 555 aa24.97■■□□□ 1.59
CPNE7-202ENST00000319518 LARGE1O95461 756 aa24.96■■□□□ 1.59
CPNE7-202ENST00000319518 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
CPNE7-202ENST00000319518 CNPY2Q9Y2B0 182 aa24.96■■□□□ 1.59
CPNE7-202ENST00000319518 CWF19L2Q2TBE0 894 aaKnown RBP24.95■■□□□ 1.59
CPNE7-202ENST00000319518 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.59
CPNE7-202ENST00000319518 SYAP1Q96A49 352 aaPredicted RBP24.95■■□□□ 1.58
CPNE7-202ENST00000319518 DTNBO60941 627 aa24.94■■□□□ 1.58
CPNE7-202ENST00000319518 R3HCC1Q9Y3T6 440 aaKnown RBP24.94■■□□□ 1.58
CPNE7-202ENST00000319518 ZSCAN22P10073 491 aaPredicted RBP24.94■■□□□ 1.58
CPNE7-202ENST00000319518 SYT1P21579 422 aa24.94■■□□□ 1.58
CPNE7-202ENST00000319518 PIP4K2AP48426 406 aaPredicted RBP24.94■■□□□ 1.58
CPNE7-202ENST00000319518 PDIA6Q15084 440 aa24.94■■□□□ 1.58
CPNE7-202ENST00000319518 CCDC39Q9UFE4 941 aa24.94■■□□□ 1.58
CPNE7-202ENST00000319518 SCN11AQ9UI33 1791 aa24.94■■□□□ 1.58
CPNE7-202ENST00000319518 MYL6BP14649 208 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 PTH1RQ03431 593 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 LIMCH1Q9UPQ0 1083 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 TERF1P54274 439 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 ZNF496Q96IT1 587 aaPredicted RBP24.93■■□□□ 1.58
CPNE7-202ENST00000319518 CHMP4AQ9BY43 222 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 PRDM11Q9NQV5 511 aa24.93■■□□□ 1.58
CPNE7-202ENST00000319518 MCM5P33992 734 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 MTX1Q13505 466 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 KSR2Q6VAB6 950 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 CPDO75976 1380 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 TTC41PQ6P2S7 1318 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 STX6O43752 255 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 ADCK5Q3MIX3 580 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 HYPKQ9NX55 129 aa24.92■■□□□ 1.58
CPNE7-202ENST00000319518 GLRX3O76003 335 aaKnown RBP24.91■■□□□ 1.58
CPNE7-202ENST00000319518 CASTP20810 708 aaKnown RBP24.91■■□□□ 1.58
CPNE7-202ENST00000319518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.91■■□□□ 1.58
CPNE7-202ENST00000319518 PA2G4Q9UQ80 394 aaKnown RBP24.91■■□□□ 1.58
CPNE7-202ENST00000319518 C5P01031 1676 aa24.91■■□□□ 1.58
CPNE7-202ENST00000319518 HSP90AB4PQ58FF6 505 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms