RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
PTPRA-202ENST00000318266 TCEANC2Q96MN5 208 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
PTPRA-202ENST00000318266 MTMR6Q9Y217 621 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 CDC42BPGQ6DT37 1551 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 TYRO3Q06418 890 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 TPD52L1Q16890 204 aaPredicted RBP11.51□□□□□ -0.57
PTPRA-202ENST00000318266 ADCK5Q3MIX3 580 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 ANO6Q4KMQ2 910 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
PTPRA-202ENST00000318266 PIP4K2BP78356 416 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 RTF1Q92541 710 aaKnown RBP11.5□□□□□ -0.57
PTPRA-202ENST00000318266 TTC14Q96N46 770 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 FLIIQ13045 1269 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 MAP3K11Q16584 847 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 OGFRQ9NZT2 677 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 MRVI1Q9Y6F6 885 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 RAD50Q92878 1312 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 ANKRD26Q9UPS8 1709 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 SGSM2O43147 1006 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
PTPRA-202ENST00000318266 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
PTPRA-202ENST00000318266 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
PTPRA-202ENST00000318266 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 TNMDQ9H2S6 317 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 CTNNA3Q9UI47 895 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
PTPRA-202ENST00000318266 TPM3P06753 285 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 GNAI3P08754 354 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 PDRG1Q9NUG6 133 aa11.49□□□□□ -0.57
PTPRA-202ENST00000318266 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
PTPRA-202ENST00000318266 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 FEZ1Q99689 392 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 LSG1Q9H089 658 aaKnown RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 KCNA6P17658 529 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 PTH1RQ03431 593 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 ZSCAN25Q6NSZ9 544 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 STAP2Q9UGK3 403 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 PIK3C2BO00750 1634 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 DCCP43146 1447 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 SSH2Q76I76 1423 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 KCNJ4P48050 445 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 NUDT16Q96DE0 195 aaKnown RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
PTPRA-202ENST00000318266 TRMT1Q9NXH9 659 aaKnown RBP11.48□□□□□ -0.57
PTPRA-202ENST00000318266 KIF20BQ96Q89 1820 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 SMTNL1A8MU46 457 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 ME3Q16798 604 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 ZNF772Q68DY9 489 aaPredicted RBP11.47□□□□□ -0.57
PTPRA-202ENST00000318266 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 CLIP2Q9UDT6 1046 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 A0A087WWV3 80 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 STK3Q13188 491 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 OS9Q13438 667 aaPredicted RBP11.47□□□□□ -0.57
PTPRA-202ENST00000318266 MTHFSDQ2M296 383 aaKnown RBP11.47□□□□□ -0.57
PTPRA-202ENST00000318266 CCDC144BQ3MJ40 725 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 ST7Q9NRC1 585 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 TMEM2Q9UHN6 1383 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 SRGAP3O43295 1099 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 KRT85P78386 507 aa11.47□□□□□ -0.57
PTPRA-202ENST00000318266 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
PTPRA-202ENST00000318266 ST3GAL1Q11201 340 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 PI4K2BQ8TCG2 481 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 BICD2Q8TD16 824 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
PTPRA-202ENST00000318266 ZNF165P49910 485 aa11.46□□□□□ -0.58
PTPRA-202ENST00000318266 ZNF75DP51815 510 aa11.46□□□□□ -0.58
PTPRA-202ENST00000318266 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.58
PTPRA-202ENST00000318266 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.58
PTPRA-202ENST00000318266 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.58
PTPRA-202ENST00000318266 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.58
PTPRA-202ENST00000318266 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.58
PTPRA-202ENST00000318266 ZNF215Q9UL58 517 aaPredicted RBP11.46□□□□□ -0.58
PTPRA-202ENST00000318266 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
PTPRA-202ENST00000318266 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms