RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
CRAT-201ENST00000318080 ANAPC15P60006 121 aa19.27■□□□□ 0.68
CRAT-201ENST00000318080 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
CRAT-201ENST00000318080 RASEFQ8IZ41 740 aa19.27■□□□□ 0.67
CRAT-201ENST00000318080 USP44Q9H0E7 712 aa19.27■□□□□ 0.67
CRAT-201ENST00000318080 RIOK3O14730 519 aaKnown RBP19.26■□□□□ 0.67
CRAT-201ENST00000318080 AMPHP49418 695 aa19.26■□□□□ 0.67
CRAT-201ENST00000318080 STAP2Q9UGK3 403 aa19.26■□□□□ 0.67
CRAT-201ENST00000318080 TCHHQ07283 1943 aa19.26■□□□□ 0.67
CRAT-201ENST00000318080 NAA30Q147X3 362 aaPredicted RBP19.26■□□□□ 0.67
CRAT-201ENST00000318080 UTP14CQ5TAP6 766 aaKnown RBP19.26■□□□□ 0.67
CRAT-201ENST00000318080 EYA1Q99502 592 aa19.25■□□□□ 0.67
CRAT-201ENST00000318080 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
CRAT-201ENST00000318080 HSPA4P34932 840 aa19.25■□□□□ 0.67
CRAT-201ENST00000318080 GIMAP6Q6P9H5 292 aa19.25■□□□□ 0.67
CRAT-201ENST00000318080 PDCL2Q8N4E4 241 aa19.25■□□□□ 0.67
CRAT-201ENST00000318080 GNAI3P08754 354 aa19.24■□□□□ 0.67
CRAT-201ENST00000318080 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
CRAT-201ENST00000318080 ZC3H6P61129 1189 aaKnown RBP19.23■□□□□ 0.67
CRAT-201ENST00000318080 SYAP1Q96A49 352 aaPredicted RBP19.23■□□□□ 0.67
CRAT-201ENST00000318080 KCNF1Q9H3M0 494 aa19.23■□□□□ 0.67
CRAT-201ENST00000318080 WDR33Q9C0J8 1336 aaKnown RBP19.23■□□□□ 0.67
CRAT-201ENST00000318080 GCP02774 474 aa19.23■□□□□ 0.67
CRAT-201ENST00000318080 CHMP3Q9Y3E7 222 aa19.23■□□□□ 0.67
CRAT-201ENST00000318080 SNX14Q9Y5W7 946 aa19.23■□□□□ 0.67
CRAT-201ENST00000318080 LARGE1O95461 756 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 AK2P54819 239 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 RUFY3Q7L099 469 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
CRAT-201ENST00000318080 PRIMPOLQ96LW4 560 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CRAT-201ENST00000318080 FIBPO43427 364 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 SURF6O75683 361 aaKnown RBP19.21■□□□□ 0.67
CRAT-201ENST00000318080 HOXC9P31274 260 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 HMGN5P82970 282 aaKnown RBP19.21■□□□□ 0.67
CRAT-201ENST00000318080 KIF1AQ12756 1690 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
CRAT-201ENST00000318080 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 PLCD3Q8N3E9 789 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 SYT1P21579 422 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 PI4K2BQ8TCG2 481 aa19.21■□□□□ 0.67
CRAT-201ENST00000318080 LTBP4Q8N2S1 1624 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 PXDNQ92626 1479 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 VGLL3A8MV65 326 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 UBTFL1P0CB47 393 aaPredicted RBP19.2■□□□□ 0.66
CRAT-201ENST00000318080 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
CRAT-201ENST00000318080 IL17RAQ96F46 866 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 TTC14Q96N46 770 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 NFAT5O94916 1531 aa19.2■□□□□ 0.66
CRAT-201ENST00000318080 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
CRAT-201ENST00000318080 ZSCAN22P10073 491 aaPredicted RBP19.19■□□□□ 0.66
CRAT-201ENST00000318080 IL17REQ8NFR9 667 aa19.19■□□□□ 0.66
CRAT-201ENST00000318080 FLT4P35916 1363 aa19.19■□□□□ 0.66
CRAT-201ENST00000318080 SGSM2O43147 1006 aa19.19■□□□□ 0.66
CRAT-201ENST00000318080 CCDC183Q5T5S1 534 aa19.19■□□□□ 0.66
CRAT-201ENST00000318080 LSG1Q9H089 658 aaKnown RBP19.19■□□□□ 0.66
CRAT-201ENST00000318080 RGPD1P0DJD0 1748 aa19.18■□□□□ 0.66
CRAT-201ENST00000318080 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
CRAT-201ENST00000318080 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
CRAT-201ENST00000318080 CGNQ9P2M7 1197 aaKnown RBP19.18■□□□□ 0.66
CRAT-201ENST00000318080 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
CRAT-201ENST00000318080 STX6O43752 255 aa19.18■□□□□ 0.66
CRAT-201ENST00000318080 PHF14O94880 888 aa19.18■□□□□ 0.66
CRAT-201ENST00000318080 GTF2F1P35269 517 aaKnown RBP eCLIP19.18■□□□□ 0.66
CRAT-201ENST00000318080 COL9A3Q14050 684 aaPredicted RBP19.18■□□□□ 0.66
CRAT-201ENST00000318080 SSH3Q8TE77 659 aa19.18■□□□□ 0.66
CRAT-201ENST00000318080 MED1Q15648 1581 aaPredicted RBP19.18■□□□□ 0.66
CRAT-201ENST00000318080 RAD50Q92878 1312 aa19.17■□□□□ 0.66
CRAT-201ENST00000318080 NBPF7P0C2Y1 421 aaPredicted RBP19.17■□□□□ 0.66
CRAT-201ENST00000318080 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
CRAT-201ENST00000318080 ARHGEF10O15013 1369 aa19.17■□□□□ 0.66
CRAT-201ENST00000318080 LTN1O94822 1766 aa19.17■□□□□ 0.66
CRAT-201ENST00000318080 ALS2Q96Q42 1657 aa19.17■□□□□ 0.66
CRAT-201ENST00000318080 DNM1Q05193 864 aaKnown RBP19.16■□□□□ 0.66
CRAT-201ENST00000318080 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
CRAT-201ENST00000318080 TMEM87AQ8NBN3 555 aa19.16■□□□□ 0.66
CRAT-201ENST00000318080 SPATA31A3Q5VYP0 1347 aa19.16■□□□□ 0.66
CRAT-201ENST00000318080 KDM4AO75164 1064 aa19.16■□□□□ 0.66
CRAT-201ENST00000318080 ADCK5Q3MIX3 580 aa19.16■□□□□ 0.66
CRAT-201ENST00000318080 LRRC59Q96AG4 307 aaKnown RBP19.16■□□□□ 0.66
CRAT-201ENST00000318080 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 GTPBP4Q9BZE4 634 aaKnown RBP19.15■□□□□ 0.66
CRAT-201ENST00000318080 SPTLC3Q9NUV7 552 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 F13A1P00488 732 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 EIF2S2P20042 333 aaKnown RBP19.15■□□□□ 0.66
CRAT-201ENST00000318080 CASTP20810 708 aaKnown RBP19.15■□□□□ 0.66
CRAT-201ENST00000318080 LRMPQ12912 555 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 ZNF771Q7L3S4 317 aaPredicted RBP19.15■□□□□ 0.66
CRAT-201ENST00000318080 ANXA1P04083 346 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 PTGS1P23219 599 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 PTH1RQ03431 593 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 ARHGEF25Q86VW2 580 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 LIMCH1Q9UPQ0 1083 aa19.15■□□□□ 0.66
CRAT-201ENST00000318080 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1194.2 ms